volume 83, issue 2, P259-267 2014
DOI: 10.1002/prot.24735
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Abstract: Normal mode analysis (NMA) is an important tool for studying protein dynamics. Because of the complexity of conventional NMA that uses an all-atom model and a semi-empirical force field, many simplified NMA models have been developed, some of which are known as elastic network models. The quality of these simplified NMA models was assessed mostly by evaluating their predictions against experimental B-factors, and rarely by comparing them with the original NMA. In this work, we take the effort to create a publi…

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