Sco1 is implicated in the copper metallation of the Cu A site in Cox2 of cytochrome oxidase. The structure of Sco1 in the metallated and apo-conformers revealed structural dynamics primarily in an exposed region designated loop 8. The structural dynamics of loop 8 in Sco1 suggests it may be an interface for interactions with Cox17, the Cu(I) donor and/or Cox2. A series of conserved residues in the sequence motif 217 KKYRVYF 223 on the leading edge of this loop are shown presently to be important for yeast Sco1 function. Cells harboring Y219D, R220D, V221D, and Y222D mutant Sco1 proteins failed to restore respiratory growth or cytochrome oxidase activity in sco1⌬ cells. The mutant proteins are stably expressed and are competent to bind Cu(I) and Cu(II) normally. Specific Cu(I) transfer from Cox17 to the mutant apo-Sco1 proteins proceeds normally. In contrast, using two in vivo assays that permit monitoring of the transient Sco1-Cox2 interaction, the mutant Sco1 molecules appear compromised in a function with Cox2. The mutants failed to suppress the respiratory defect of cox17-1 cells unlike wild-type SCO1. In addition, the mutants failed to suppress the hydrogen peroxide sensitivity of sco1⌬ cells. These studies implicate different surfaces on Sco1 for interaction or function with Cox17 and Cox2.Cytochrome c oxidase (CcO) 2 is the terminal enzyme of the energy-transducing, electron transfer chain within the mitochondrial inner membrane (IM). The enzyme contains two copper centers important for its function (1). One center is the binuclear copper site (Cu A ) residing in the Cox2 subunit. The second center is the Cu B site in the Cox1 subunit that forms a heterobimetallic site with heme a 3 . The formation of the copper sites in the two mitochondrially encoded subunits occurs within the mitochondrial intermembrane space (IMS) by a series of accessory proteins Cox11, Cox17, and Sco1 (2). Cox17 is a soluble Cu(I)-binding protein largely localized within the IMS. In yeast, CuCox17 appears to specifically transfer Cu(I) to the Cu A site via the IM-tethered Sco1 and to the Cu B site via the IM-anchored Cox11 (3).The role of Cox17 in formation of the Cu A site was initially implicated from the isolation of SCO1 as a high copy suppressor of cox17-1 respiratory deficient cells (4). Yeast lacking Sco1 are devoid of CcO activity and show greatly attenuated Cox2 protein levels (5, 6). Cu(I) bound to Cox17 can be transferred to Sco1 through an apparent transient protein-mediated complex. The C57Y mutation in the cox17-1 strain precludes Cu(I) transfer to Sco1, but not Cox11, consistent with each transfer occurring through a specific protein complex (3). Although attempts to isolate the Cox17⅐Sco1 complex have failed, a mass spectrometry study with human Sco1 and Cox17 revealed a low abundance ion consistent with a complex (7). Copper metallation of Sco1 and Cox11 is an intermediate step in the transfer of Cu(I) to Cox2 and Cox1, respectively. One preliminary study reported an interaction of Sco1 with Cox2 (8), but no direct...