Summary:Reactive oxygen species have been implicated in brain injury after ischemic stroke. These oxidants can react and damage the cellular macromolecules by virtue of the reactivity that leads to cell injury and necrosis. Oxidants are also mediators in signaling involving mitochondria, DNA repair enzymes, and transcription factors that may lead to apoptosis after cerebral ischemia. Transgenic or knockout mice with cell-or sitespecific prooxidant and antioxidant enzymes provide useful tools in dissecting the events involving oxidative stress in signaling and damage in ischemic brain injury. Key Words: Reactive oxygen species-Free radicals-Apoptosis-Cerebral ischemia-Transgenic and knockout mice-Oxidative stress signaling.Reactive oxygen radicals have been implicated in the pathophysiology of many neurologic disorders and brain dysfunctions (Kontos, 1985;Siesjö et al., 1989;Chan, 1994). Evidence has accumulated during the past two decades showing that reactive oxygen radicals are involved in brain injuries such as cerebral ischemia and reperfusion. In focal or global cerebral ischemia, cerebral blood flow (CBF) is reduced in brain regions that are supplied with oxygen by the occluded vessels. Reoxygenation during spontaneous or thrombolytic reperfusion provides oxygen as a substrate for numerous enzymatic oxidation reactions in the cytosolic compartments or subcellular organelles and mitochondria. It has been demonstrated that approximately 2% to 5% of the electron flow in isolated brain mitochondria produces superoxide anion radicals (O 2 ·− ) and hydrogen peroxide (H 2 O 2 ) (Boveris and Chance, 1973). These constantly produced reactive oxygen species (ROS) are scavenged by superoxide dismutase (SOD), glutathione peroxidase (GSHPx), and catalase. Other small molecular antioxidants, including glutathione (GSH), ascorbic acid, and ␣-tocopherol, are also involved in the detoxification of free radicals. During reperfusion, these endogenous antioxidative defenses are likely to be perturbed as a result of overproduction of oxygen radicals by cytosolic prooxidant enzymes and mitochondria, inactivation of detoxification systems, consumption of antioxidants, and failure to adequately replenish antioxidants in ischemic brain tissue. It has been demonstrated in numerous studies that ROS are directly involved in oxidative damage with cellular macromolecules such as lipids, proteins, and nucleic acids in ischemic tissues, which lead to cell death. Recent studies have provided evidence that indirect signaling pathways by ROS can also cause cellular damage and death in cerebral ischemia and reperfusion. Despite many existing methodologies that allow investigators to quantify various oxygen radicals such as hydroxyl radical (Oliver et al., 1990) and nitric oxide radical