Unlike most other bacteria, mycobacteria make fatty acids with the multidomain enzyme eukaryote-like fatty acid synthase I (FASI). Previous studies have demonstrated that the tuberculosis drug pyrazinamide and 5-chloro-pyrazinamide target FASI activity. Biochemical studies have revealed that in addition to C 16:0 , Mycobacterium tuberculosis FASI synthesizes C 26:0 fatty acid, while the Mycobacterium smegmatis enzyme makes C 24:0 fatty acid. In order to express M. tuberculosis FASI in a rapidly growing Mycobacterium and to characterize the M. tuberculosis FASI in vivo, we constructed an M. smegmatis ⌬fas1 strain which contained the M. tuberculosis fas1 homologue. The M. smegmatis ⌬fas1 (attB::M. tuberculosis fas1) strain grew more slowly than the parental M. smegmatis strain and was more susceptible to 5-chloro-pyrazinamide. Surprisingly, while the M. smegmatis ⌬fas1 (attB::M. tuberculosis fas1) strain produced C 26:0 , it predominantly produced C 24:0 . These results suggest that the fatty acid elongation that produces C 24:0 or C 26:0 in vivo is due to a complex interaction among FASI, FabH, and FASII and possibly other systems and is not solely due to FASI elongation, as previously suggested by in vitro studies.Mycobacterium tuberculosis infects one-third of the world's population, and it is estimated that 1% of the world's population is newly infected with this organism each year (31). The mycobacterial cell wall is a complex structure that plays a role in both M. tuberculosis virulence and drug resistance (12, 16). These features of the mycobacterial cell wall are conferred by a wide variety of unique lipids that compose 60% of the cell wall. Mycolic acids (C 74 to C 90 ␣-alkyl -hydroxyl fatty acids) are the major lipid components of the mycobacterial cell wall and the hallmark of mycobacteria and related species (16). Long-chain saturated fatty acids, which are precursors of cell membrane phospholipids, mycolic acids, and other complex lipids, are generated by the type I fatty acid synthase (FASI) in mycobacteria (4,6,16). Mycobacteria are unusual among prokaryotes in that they possess both FASI (typically found in parasites, fungi, and all higher eukaryotes) and the type II fatty acid synthase (FASII), which is found in most prokaryotes and plants. The multifunctional FASI enzyme is a monomer that contains seven separate domains with catalytic activities, including an active site for the prosthetic group 4Ј-phosphopantetheine of the acyl carrier protein (ACP) (4, 6). Mycobacterial FASI generates C 16:0 from acetyl coenzyme A (acetylCoA) primers and elongates the molecules to produce C 24:0/26:0 fatty acyl-CoA derivatives, which are the precursors of other fatty acid synthases and polyketide systems (8,16). In contrast, FASII elongates the FASI products to produce meromycolate precursors, which are modified and condensed with C 24:0/26:0 to form mycolic acids (8,16). In vitro studies have shown that mycobacterial FASI produces a unique bimodal distribution of fatty acids (15,23). In addition to C 16:0 , C...