“…Cinnamic acid, coumarin, and ferulic acid are phenylpropanoid metabolites, catechin and epicatechin are flavonoids metabolites, and HHO is a sesquiterpene metabolite. − Five DEGs were identified in the phenylpropanoid synthesis pathway ( p < 0.05): two genes ( PAL1 and PAL2 ) annotated as phenylalanine amino lyase (PAL), six β-glucosidase (bglx) genes ( bglx1 , bglx2 , bglx3 , bglx4 , bglx5 , and bglx6 ), two cinnamate-4-hydroxylase (C4H) genes ( C4H1 and C4H2 ), two 4-coumaroyl-CoA ligase (4CL) genes ( 4CL1 and 4CL2 ), and three caffeic acid O -methyltransferase (COMT) genes ( COMT1 , COMT2 , and COMT3 ). Most genes were highly expressed in roots and blades.…”