The global pandemic caused by severe acute respiratory syndromecoronavirus-2 (SARS-CoV-2) has now persisted for two years and impacted nearly everyone on the planet; resulting in nearly half a billion people infected, close to 6 million deaths worldwide, and immeasurable effects on overall health and well-being of the population. In contrast to other ubiquitous respiratory viruses, SARS-CoV-2 infection is unique in its wide range of clinical manifestations that comprise COVID-19, from minimal symptoms and mild disease to severe lung damage, acute respiratory distress syndrome (ARDS), multiorgan failure, and death. COVID-19 can also vary in durations from several days, to weeks, to persistence for months in the form of long COVID. In addition, the high transmissibility of SARS-CoV-2, along with the increasing mutation burden in emerging variant strains, has led to infectious spread even among individuals who have developed immunity through previous infection or vaccination. [1][2][3] In order to develop improved treatments for those at risk for severe COVID-19 and establish protective immunity to SARS-CoV-2 strains that continue to mutate and disseminate infections globally, new insights into the immune mechanisms that control infection severity and establish long-term protection are needed.The disease outcome to SARS-CoV-2 infection depends on the immune response, which occurs at the site of infection in the lung and respiratory tract. In many individuals, virus is cleared from the lung with minimal damage, while in others, the immune response becomes dysregulated, resulting in extensive inflammation, severe lung damage, organ failure, and/or long-term effects even in those who recover. Characterizing the immune response to SARS-CoV-2 both in circulation and in the tissue sites of infection is necessary to gain new insights and develop strategies for protecting the population from current and future pandemic strains.Coordinated processes between the innate and adaptive immune systems are essential to neutralize infections with minimal