Protein-Protein Interactions - Computational and Experimental Tools 2012
DOI: 10.5772/36568
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Advances in Human-Protein Interaction - Interactive and Immersive Molecular Simulations

Abstract: International audienc

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Cited by 35 publications
(26 citation statements)
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“…If the periodic disturbance signal igd also comes, then igd is also a positive value. Two disturbance signals functioning at the same time will further increase the output voltage, then accelerate the detection of the island [12]. Its variation tendency is as shown in Fig.…”
Section: Analysis Of Three Kinds Of Detection Methodsmentioning
confidence: 99%
“…If the periodic disturbance signal igd also comes, then igd is also a positive value. Two disturbance signals functioning at the same time will further increase the output voltage, then accelerate the detection of the island [12]. Its variation tendency is as shown in Fig.…”
Section: Analysis Of Three Kinds Of Detection Methodsmentioning
confidence: 99%
“…Docking-The best theoretical complexes obtained by rigid docking were used as either a starting position or a target position for flexible interactive docking simulation using the BioSpring program (29). To take into account the different secondary structural elements of nNOS-PDZ while allowing a sufficient degree of freedom for flexible docking, we chose a multiple distance cut-off to define backbone particles as previously described (24).…”
Section: R16 -17⅐nnos-pdz Complex By Interactive Flexiblementioning
confidence: 99%
“…Both proteins were converted to an augmented Elastic Network Model, which links by a spring two particles when they are closer than the cut-off distances. An electrostatic potential grid of R16 -17 was calculated using the APBS program (30), the Amber force field and 50 mM sodium and chloride ions, to guide nNOS-PDZ using a Phantom Omni Sensable haptic device (29).…”
Section: R16 -17⅐nnos-pdz Complex By Interactive Flexiblementioning
confidence: 99%
“…In principle, interactive simulations provide a much lower latency approach for manipulating and exploring molecular structures [ 1 ]. Such methods provide a virtual or augmented reality framework for immersing the user within the simulation, with the aim that molecular interaction becomes as intuitive as possible [ 2 ].…”
Section: Virtual and Augmented Reality And Immersive Molecular Simulamentioning
confidence: 99%