The hydrogen-bonded (H-bonded) base pairs, double H-bonded A•T and triple H-bonded G•C in DNA, are important units for storing, encoding, and expressing genetic information. Owing to the interference from water, however, the formation of H-bonded base pairs from short deoxynucleotide fragments such as mono-or di-deoxynucleotide are not easily achieved in aqueous solutions. Here, we report a host-guest strategy to stabilize H-bonded base pairs of monodeoxynucleotides by a tetraphenylethene (TPE)-based octacationic cage to form host-guest complexes in water. The X-ray structure of cage ⊃ base pair complex clearly shows the double hydrogen bonds between A and T can be stabilized inside the hydrophobic cavity of the cage to form a H-bonded base pair (A•T) with the Hoogsteen pairing rule. Furthermore, the adaptive chirality of the cage with excess right-handed (P) rotational conformation of TPE units is triggered by two base pairs (A•T and G•C) to exhibit differentiated multiple responses, including turn-on/turn-off fluorescence, negative circular dichroism, and negative circularly polarized luminescence in water.