“…Apoptotic cells were assessed morphologically by identifying Gene Therapy condensed and fragmented nuclei from 2000 cells in H& E slides using methods described elsewhere, 42 and areas in sections stained for collagens by Sirius red F2BA or trichrome were quantified by image analysis. 43 An Image-1/AT image acquisition and analysis system (Universal Imaging, Chester, PA, USA) incorporating an Axioskop 50 microscope (Carl Zeiss, Thornwood, NY, USA) was used to capture and analyze Sirius red-and trichrome-stained tissue sections at ×40 magnification. Detection thresholds were set for the appropriate color of stained collagen based on an intensely labeled point and a default color threshold range was assigned.…”