Ceramides (Cer) are bioactive sphingolipids that have
been proposed
as potential disease biomarkers since they are involved in several
cellular stress responses, including apoptosis and senescence. 1-Deoxyceramides
(1-deoxyCer), a particular subtype of noncanonical sphingolipids,
have been linked to the pathogenesis of type II diabetes. To investigate
the metabolism of these bioactive lipids, as well as to have a better
understanding of the signaling processes where they participate, it
is essential to expand the toolbox of fluorescent sphingolipid probes
exhibiting complementary subcellular localization. Herein, we describe
a series of new sphingolipid probes tagged with two different organic
fluorophores, a far-red/NIR-emitting coumarin derivative (COUPY) and
a green-emitting BODIPY. The assembly of the probes involved a combination
of olefin cross metathesis and click chemistry reactions as key steps,
and these fluorescent ceramide analogues exhibited excellent emission
quantum yields, being the Stokes’ shifts of the COUPY derivatives
much higher than those of the BODIPY counterparts. Confocal microscopy
studies in HeLa cells confirmed an excellent cellular permeability
for these sphingolipid probes and revealed that most of the vesicles
stained by COUPY probes were either lysosomes or endosomes, whereas
BODIPY probes accumulated either in Golgi apparatus or in nonlysosomal
intracellular vesicles. The fact that the two sets of fluorescent
Cer probes have such different staining patterns indicates that their
subcellular distribution is not entirely defined by the sphingolipid
moiety but rather influenced by the fluorophore.