Reticulon 3 (RTN3) has recently been shown to modulate Alzheimer BACE1 activity and to play a role in the formation of dystrophic neurites present in Alzheimer brains. Despite the functional importance of this protein in Alzheimer disease pathogenesis, the functional correlation to the structural domain of RTN3 remained unclear. RTN3 has two long transmembrane domains, but its membrane topology was not known. We report here that the first transmembrane domain dictates membrane integration and its membrane topology. RTN3 adopts a -shape structure with two ends facing the cytosolic side. Subtle changes in RTN3 membrane topology can disrupt its binding to BACE1 and its inhibitory effects on BACE1 activity. Thus, the determination of RTN3 membrane topology may provide an important structural basis for our understanding of its cellular functions.
Reticulon (RTN)2 proteins are a group of membrane-bound proteins that are largely localized in the endoplasmic reticulum (ER) (1, 2), perhaps more restricted to the tubular ER (3). RTNs exist in plants, fungi, and animals (4). In mammalian genomes, four independent reticulon genes, rtn1 to rtn4, have been identified to encode a large number of gene products (1, 2). All RTNs are composed of a variable length of N-terminal domain, which is completely divergent among RTN members, and a highly conserved RTN homology domain (RHD) that is unique to this family of proteins. Within the RHD, there exist two long stretches (28 -36 amino acids) of hydrophobic residues, and each is expected to embed RTNs in the membrane.The divergent N-terminal domain among RTNs potentially allows each RTN member to exert its specific function. RTN4, or its more popular acronym Nogo, is identified as a critical inhibitory molecule in axonal growth and regeneration (5, 6). Recently, reticulon proteins (including Nogo) have been shown to interact with â€-secretase, also known as â€-site APP-cleaving enzyme 1 (BACE1) (7-10), and this interaction negatively modulates the enzymatic activity of BACE1 (11-13). Among the RTNs, we have paid particular attention to RTN3 because of its strong inhibitory effects on BACE1 activity and high expression by neurons. RTN3 is localized not only in the ER compartment but also in the Golgi (11, 14), axons, dendrites, and growth cone (15). The localization of RTN3 in the neuritic region suggests its potential role in neuritic functions. Most recently, we have demonstrated that RTN3 also plays a role in the formation of dystrophic neurites in Alzheimer brains (15).Because of the important role of RTN3 in Alzheimer pathogenesis, we set out to study the structure and function of RTN3. We report herein that the first transmembrane stretch or domain (TM1) is important for the membrane insertion of RTN3. Disruption of the TM1 of RTN3 results in misfolding of the mutant protein and failure to integrate the protein into the membrane. We also show that RTN3 adopts a -shape membrane topology with both the N-and C-terminal ends facing the cytosolic side. Knowledge from this study will be...