2017
DOI: 10.1534/g3.117.043679
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Abstract: Many important genes in agriculture correspond to transcription factors (TFs) that regulate a wide range of pathways from flowering to responses to disease and abiotic stresses. In this study, we identified 5776 TFs in hexaploid wheat (Triticum aestivum) and classified them into gene families. We further investigated the NAC family exploring the phylogeny, C-terminal domain (CTD) conservation, and expression profiles across 308 RNA-seq samples. Phylogenetic trees of NAC domains indicated that wheat NACs divide… Show more

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Cited by 55 publications
(52 citation statements)
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“…Recently, a study by Borrill et al . () of the wheat NAC transcription family also identified a novel C‐terminal motif conserved among some NAC proteins from the phylogenetic subgroup h in which TaNACL‐D1 was found (Borrill et al ., ). Interestingly, this subgroup h specific motif is similar to a section of the C‐terminal region predicted within TaNACL‐D1 and includes a continuous stretch of positively charged lysines (K) or arginines (R) coding for a putative monopartite Nuclear Localization Signal (NLS) identified using NLS mapper (Kosugi et al ., 2009b) (Figures a and S1b, S2).…”
Section: Resultsmentioning
confidence: 97%
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“…Recently, a study by Borrill et al . () of the wheat NAC transcription family also identified a novel C‐terminal motif conserved among some NAC proteins from the phylogenetic subgroup h in which TaNACL‐D1 was found (Borrill et al ., ). Interestingly, this subgroup h specific motif is similar to a section of the C‐terminal region predicted within TaNACL‐D1 and includes a continuous stretch of positively charged lysines (K) or arginines (R) coding for a putative monopartite Nuclear Localization Signal (NLS) identified using NLS mapper (Kosugi et al ., 2009b) (Figures a and S1b, S2).…”
Section: Resultsmentioning
confidence: 97%
“…In general, homeologous NAC genes share similar expression patterns (Borrill et al ., ). In our in silico analysis, TaNACL‐D1 and homeologs all have low basal expression and are induced by F. graminearum to a comparable extent.…”
Section: Discussionmentioning
confidence: 97%
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