2018
DOI: 10.1186/s12864-018-4612-2
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Abstract: BackgroundThe soil dwelling saprotrophic non-pathogenic fungus Fusarium venenatum, routinely used in the commercial fermentation industry, is phylogenetically closely related to the globally important cereal and non-cereal infecting pathogen F. graminearum. This study aimed to sequence, assemble and annotate the F. venenatum (strain A3/5) genome, and compare this genome with F. graminearum.ResultsUsing shotgun sequencing, a 38,660,329 bp F. venenatum genome was assembled into four chromosomes, and a 78,618 bp … Show more

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Cited by 31 publications
(23 citation statements)
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“…venenatum and F . graminearum revealed a high degree of synteny between the two genomes, including genes known to be involved in virulence [ 89 ]. Fusarium venenatum may be nonpathogenic to wheat because it is missing two transcription factors previously shown to be required for F .…”
Section: Discussionmentioning
confidence: 99%
See 1 more Smart Citation
“…venenatum and F . graminearum revealed a high degree of synteny between the two genomes, including genes known to be involved in virulence [ 89 ]. Fusarium venenatum may be nonpathogenic to wheat because it is missing two transcription factors previously shown to be required for F .…”
Section: Discussionmentioning
confidence: 99%
“…venenatum , are thought to contribute to the lack of aggressiveness toward wheat in F . venenatum and the divergent lifestyles of these fungi [ 89 ]. These findings also highlight the need for further research on the evolution of pathogenesis in other species within the FSAMSC to better understand what factors contribute to FHB pathogen aggressiveness toward cereals.…”
Section: Discussionmentioning
confidence: 99%
“…pisi (51.7%) (Coleman et al, 2009). Similar to other Fusarium species (King et al, 2018), a total of 14,353 genes were predicted using the MAKER2 gene modeling program (Holt and Yandell, 2011). Completeness of the sequenced genome was quantified by the presence of core eukaryotic genes and was shown to be comparable to that of the finished F. graminearum genome and other related species (Table 1 and Supplementary Figure S2).…”
Section: Resultsmentioning
confidence: 99%
“…Similar mutations were checked for in the non-pathogenic Fusarium species, Fusarium venenatum which is closely related to F. graminearum . In the fully completed and assembled F. venenatum genome, no FgRALF homologue was found, suggesting this gene is probably absent in this species ( King et al., 2018 ). In F. graminearum , FgRALF is in the sub-telomere region of chromosome 3 within the small gene cluster C-VII.…”
Section: Resultsmentioning
confidence: 99%
“…This cluster was previously predicted to be enriched for small secreted proteins ( Brown et al., 2012 ). Blast analysis of this cluster within the F. venenatum genome ( King et al., 2018 ) identified that not only FgRALF , but at least two more genes in the cluster are absent in F. venenatum ( Fig. 2 ).…”
Section: Resultsmentioning
confidence: 99%