2017
DOI: 10.1016/j.pbi.2017.01.007
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Abstract: Advances in wheat genomics have lagged behind other major cereals (e.g., rice and maize) due to its highly repetitive and large polyploid genome. Recent technological developments in sequencing and assembly methods, however, have largely overcome these barriers. The community now moves to an era centred on functional characterisation of the genome. This includes understanding sequence and structural variation as well as how information is integrated across multiple homoeologous genomes. This understanding prom… Show more

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Cited by 97 publications
(59 citation statements)
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“…Alongside the advances in genomic resources, there is a need to rapidly and accurately assess the variation in specific germplasm. The use of ‘SNP‐CHIPs’, arrays of thousands of cultivar SNPs (single nucleotide polymorphisms), has rapidly increased the amount and accessibility of genotype data for specific cultivars of interest (for review, see Uauy, ). As sequencing methods and imputation methods improve (Wang et al ., 2018a), low coverage (skim) sequencing will soon be a viable option in polyploid wheat (Golicz et al ., ).…”
Section: Genotypingmentioning
confidence: 99%
See 1 more Smart Citation
“…Alongside the advances in genomic resources, there is a need to rapidly and accurately assess the variation in specific germplasm. The use of ‘SNP‐CHIPs’, arrays of thousands of cultivar SNPs (single nucleotide polymorphisms), has rapidly increased the amount and accessibility of genotype data for specific cultivars of interest (for review, see Uauy, ). As sequencing methods and imputation methods improve (Wang et al ., 2018a), low coverage (skim) sequencing will soon be a viable option in polyploid wheat (Golicz et al ., ).…”
Section: Genotypingmentioning
confidence: 99%
“…The fact that many productivity traits are inherited in a quantitative manner and require field‐based phenotyping also compounds the issues. However, over the past few years, many of the entry barriers to wheat research have been dramatically lowered thanks to multiple genomics developments and the availability of open access resources (Uauy, ). For many purposes, wheat can now be treated (almost) like a model crop species for trait discovery.…”
Section: Introductionmentioning
confidence: 99%
“…Genetic and genomic tools developed in durum wheat are increasingly integrated with those of bread wheat (Maccaferri et al ., ). The current genomic revolution in wheat, which has seen the development and release of the genome sequence of several Triticum species including bread wheat (The International Wheat Genome Sequencing Consortium, ), wild emmer wheat (Avni et al ., ), and diploid wheats (Ling et al ., ; Wang et al ., ), provides new tools for the characterization of the genetic basis of complex traits and for the fruitful exploitation of untapped allele pools (Uauy, ).…”
Section: Introductionmentioning
confidence: 99%
“…Vast amounts of genetics and genomics resources are becoming available directly in crop species such as wheat (Uauy, 2017), rice (Wing et al 2018), maize (Nannas, Dawe 2015) and also in Brassica species (Lawrenson et al 2015;Chalhoub et al 2014). Therefore, addressing fundamental questions is no longer restricted to Arabidopsis or other relatively simple genetic systems.…”
Section: Perspectivesmentioning
confidence: 99%