Aim. To study calpastatin (CAST) and сallipyge (CLPG) genes polymorphism in Prydniprovska meat sheep. Methods. The studies were conducted using PCR-RFLP method. DNA was isolated from 47 animals. The amplicons were treated with restriction endonucleases MspI and FaqI for genes CAST and CLPG, respectively. Results. The study determined the polymorphism of CAST gene fragment. Two alleles – M (336, 286 b.p.) and N (622 b.p.) with the frequency of 0.83 and 0.17, respectively, were detected. The frequency of genotypes was as follows: ММ – 0.77, MN – 0.13 and NN – 0.10. There was a noted tendency towards the increase in live bodyweight of 4-month-old lambs, carriers of N allele (genotypes NN and MN), compared to the index for the lambs of the same age with genotype MM. Locus CLPG was monomorphic, only allele A was determined (278, 117 and 31 b.p.). Allele G with the mutation, manifested in muscle hypertrophy phenotype, was not detected, all the animals under investigation had genotype AA. Conclusions. CAST gene polymorphism was deter- mined in Prydniprovska meat sheep during our work. The tendency towards the increase in live bodyweight of 90-day-old lambs, carriers of allele N, was established which demonstrated promising perspectives of further studies on associations of this gene and meat qualities of Prydniprovska meat sheep. The obtained results on the monomorphic nature of locus CLPG and the absence of mutation, related to muscle hypertrophy phenotype, demonstrated that the mutation of this gene may be built into the genome of domestic breeds of sheep only via cross-breeding with foreign breeds, in which this trait is manifested.
Marker-Assisted Selection is getting increasing attention in animal breeding as an effective tool for choosing animals with desirable traits. Identification of molecular markers which are related to candidate genes is a promising approach for improving economic traits and has to be evaluated for further gene-trait associations. Single nucleotide polymorphisms are genetic markers that can be associated with production traits. SNP genotyping has to be done additionally for each breed to see if they are polymorphic and have significant associations with certain traits. Among the candidate genes that influence the expression of productive traits, special attention is drawn to LY49B, EDNRB and CSN3 genes. Gene EDNRB is associated with lethal white foal syndrome, LY49B is responsible for induction of immune response and CSN3 gene is responsible for reproduction traits in horses. SNPs LY49B с. 1763 C>T, EDNRB g.118 TC/AG and CSN3 g. 66 A>G have been receiving increasing attention as potential markers which are responsible for developing important selection traits in horses. The study was conducted on Ukrainian Riding Horse, Russian Trotter and Orlov Trotter horse breeds (50 animals for each breed). Genotyping was performed using PCR–RFLP method. EDNRB polymorphism g. 118 TC/AG was polymorphic only in the Ukrainian Riding horse breed. This indicates carriers of the lethal mutation of the White Foal Syndrome (LWFS) only in the mentioned breed. SNP CSN3 g. 66 A>G turned out to be polymorphic (with the predominance of A g. 66 allele) and low-informative (i.e., PIC=0,090-0,122) in Ukrainian Riding Horse, Russian Trotter and Orlov Trotterther breeds. SNP LY49B c. 1763 C> T turned out to be low-polymorphic (with the predominance of G c.1763 allele) but enough informative (i.e., PIC=0,212-0,365) in Ukrainian Riding Horse, Russian Trotter and Orlov Trotterther breeds. Consequently, it is highly prospective to create experimental groups for studied horse breeds to identifying possible associations only for SNP CSN3 g. 66 A>G.
Much attention is paid to the study of kappa-casein gene polymorphism in dairy breeds of cattle. Moreover, there is a lack of research on kappa-casein polymorphism in cattle beef breeds. Knowing that different alleles of the kappa-casein gene have different effects on milk yield and milk protein content, it would be important to study the exact allele associations in Ukrainian Charolais cattle. In addition, it would be relevant to find out whether there is an effect of different alleles of the kappa-casein gene on growth parameters in offspring. In addition, the current study would be highly relevant due to no previous research of κ- Cn in Ukrainian Charolais cattle. The polymorphism of the kappa-casein (κ-Cn) gene was studied in the population of Ukrainian Charolais cattle (n=29), "Privilla" agricultural company (Ukraine, Luhansk region) using the PCR-PDRF method. DNA was extracted from blood using the DNA Sorb isolation kit (AmplySens). Hind III restriction enzyme (FastDigest, Thermo Scientific) was used to see 2 allelic variants of κ-Cn polymorphism, which are A (273 bp) and B (182, 91 bp). The frequency of the A allele was 0.57±0.065 and 0.43±0.065 of the B allele. According to the genotyping results, allele frequency distribution in the population of 2021 did not reliably differ from the population of 2012. As a result, allele frequencies of the kappa-casein gene in 2012 for allele A was 0.61±0.054 and for B 0.39±0.054. This indicates the lack of selection pressure on population dynamics such as selective selection and gene drift over a period of 10 years. The frequency of AA genotypes was equal to 0.31, of BB genotype to 0.17 and of AB to 0.52. It was found that the theoretically expected number of genotypes, calculated according to the Hardy-Weinberg principle, did not reliably differ from the actual number. It could be related to current alleles being within an equilibrium state. In cattle with different genotypes of the κ-Cn gene, the values of the liveweight gain (kg) and the average daily gain (g) were calculated. In cattle with the BB genotype, there was an increase in the weight gain of their calves at weaning at 210 days (206.0±5.65 kg). In addition, the average daily gain of calves was 981.0±26.94 g, compared to genotypes AA (201.4±8.08 kg and 958.9±37.85 g, respectively) and AB – (196.8±2.45 kg and 936.9±11.73 g, respectively). Though, there were no significant differences between AA, BB and AB genotypes considering the studied parameters. Keywords: gene, kappa-casein, cattle, Charolais, polymorphism, meat productivity.
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