We report improved whole-genome shotgun sequences for the genomes of indica and japonica rice, both with multimegabase contiguity, or almost 1,000-fold improvement over the drafts of 2002. Tested against a nonredundant collection of 19,079 full-length cDNAs, 97.7% of the genes are aligned, without fragmentation, to the mapped super-scaffolds of one or the other genome. We introduce a gene identification procedure for plants that does not rely on similarity to known genes to remove erroneous predictions resulting from transposable elements. Using the available EST data to adjust for residual errors in the predictions, the estimated gene count is at least 38,000–40,000. Only 2%–3% of the genes are unique to any one subspecies, comparable to the amount of sequence that might still be missing. Despite this lack of variation in gene content, there is enormous variation in the intergenic regions. At least a quarter of the two sequences could not be aligned, and where they could be aligned, single nucleotide polymorphism (SNP) rates varied from as little as 3.0 SNP/kb in the coding regions to 27.6 SNP/kb in the transposable elements. A more inclusive new approach for analyzing duplication history is introduced here. It reveals an ancient whole-genome duplication, a recent segmental duplication on Chromosomes 11 and 12, and massive ongoing individual gene duplications. We find 18 distinct pairs of duplicated segments that cover 65.7% of the genome; 17 of these pairs date back to a common time before the divergence of the grasses. More important, ongoing individual gene duplications provide a never-ending source of raw material for gene genesis and are major contributors to the differences between members of the grass family.
The q-rung orthopair fuzzy sets (q-ROFSs), originated by Yager, are good tools to describe fuzziness in human cognitive processes. The basic elements of q-ROFSs are q-rung orthopair fuzzy numbers (q-ROFNs), which are constructed by membership and nonmembership degrees. As realistic decision-making is very complicated, decision makers (DMs) may be hesitant among several values when determining membership and nonmembership degrees. By incorporating dual hesitant fuzzy sets (DHFSs) into q-ROFSs, we propose a new technique to deal with uncertainty, called q-rung dual hesitant fuzzy sets (q-RDHFSs). Subsequently, we propose a family of q-rung dual hesitant fuzzy Heronian mean operators for q-RDHFSs. Further, the newly developed aggregation operators are utilized in multiple attribute group decision-making (MAGDM). We used the proposed method to solve a most suitable supplier selection problem to demonstrate its effectiveness and usefulness. The merits and advantages of the proposed method are highlighted via comparison with existing MAGDM methods. The main contribution of this paper is that a new method for MAGDM is proposed.
[1] The real-time availability of satellite-derived precipitation estimates provides hydrologists an opportunity to improve current hydrologic prediction capability for medium to large river basins. Due to the availability of new satellite data and upgrades to the precipitation algorithms, the Tropical Rainfall Measuring Mission (TRMM) Multisatellite Precipitation Analysis real-time estimates (TMPA-RT) have been undergoing several important revisions over the past ten years. In this study, the changes of the relative accuracy and hydrologic potential of TMPA-RT estimates over its three major evolving periods were evaluated and inter-compared at daily, monthly and seasonal scales in the high-latitude Laohahe basin in China. Assessment results show that the performance of TMPA-RT in terms of precipitation estimation and streamflow simulation was significantly improved after 3 February 2005. Overestimation during winter months was noteworthy and consistent, which is suggested to be a consequence from interference of snow cover to the passive microwave retrievals. Rainfall estimated by the new version 6 of TMPA-RT starting from 1 October 2008 to present has higher correlations with independent gauge observations and tends to perform better in detecting rain compared to the prior periods, although it suffers larger mean error and relative bias. After a simple bias correction, this latest data set of TMPA-RT exhibited the best capability in capturing hydrologic response among the three tested periods. In summary, this study demonstrated that there is an increasing potential in the use of TMPA-RT in hydrologic streamflow simulations over its three algorithm upgrade periods, but still with significant challenges during the winter snowing events.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
hi@scite.ai
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.