The base of Earth's critical zone (CZ) is commonly shielded from study by many meters of overlying rock and regolith. Though deep CZ processes may seem far removed from the surface, they are vital in shaping it, preparing rock for infusion into the biosphere and breaking Earth materials down for transport across landscapes. This special issue highlights outstanding challenges and recent advances of deep CZ research in a series of articles that we introduce here in the context of relevant literature dating back to the 1500s. Building on several contributions to the special issue, we highlight four exciting new hypotheses about factors that drive deep CZ weathering and thus influence the evolution of life-sustaining CZ architecture. These hypotheses have emerged from recently developed process-based models of subsurface phenomena including: fracturing related to subsurface stress fields; weathering related to drainage of bedrock under hydraulic head gradients; rock damage from frost cracking due to subsurface temperature gradients; and mineral reactions with reactive fluids in subsurface chemical potential gradients. The models predict distinct patterns of subsurface weathering and CZ thickness that can be compared with observations from drilling, sampling and geophysical imaging. We synthesize the four hypotheses into an overarching conceptual model of fracturing and weathering that occurs as Earth materials are exhumed to the surface across subsurface gradients in stress, hydraulic head, temperature, and chemical potential. We conclude with a call for a coordinated measurement campaign designed to comprehensively test the four hypotheses across a range of climatic, tectonic and geologic conditions.

Earth's land surface teems with life. Although the distribution of ecosystems is largely explained by temperature and precipitation, vegetation can vary markedly with little variation in climate. Here we explore the role of bedrock in governing the distribution of forest cover across the Sierra Nevada Batholith, California. Our sites span a narrow range of elevations and thus a narrow range in climate. However, land cover varies from Giant Sequoia (Sequoiadendron giganteum), the largest trees on Earth, to vegetation-free swaths that are visible from space. Meanwhile, underlying bedrock spans nearly the entire compositional range of granitic bedrock in the western North American cordillera. We explored connections between lithology and vegetation using measurements of bedrock geochemistry and forest productivity. Tree-canopy cover, a proxy for forest productivity, varies by more than an order of magnitude across our sites, changing abruptly at mapped contacts between plutons and correlating with bedrock concentrations of major and minor elements, including the plant-essential nutrient phosphorus. Nutrient-poor areas that lack vegetation and soil are eroding more than two times slower on average than surrounding, more nutrientrich, soil-mantled bedrock. This suggests that bedrock geochemistry can influence landscape evolution through an intrinsic limitation on primary productivity. Our results are consistent with widespread bottom-up lithologic control on the distribution and diversity of vegetation in mountainous terrain.erosion rates | bedrock weathering | critical zone | forest distribution V egetation captures solar energy and sends it cascading through ecosystems, creating habitats for other organisms and fixing nutrients and carbon from the atmosphere. Vegetation also plays an important although still incompletely understood role in the breakdown and erosion of rock (1-3) and thus the evolution of Earth's topography (4). Understanding the factors that determine where vegetation thrives-and where it does not-is therefore fundamental to many disciplines, including ecology, geomorphology, geochemistry, and pedology. As a substrate for life, lithology can influence overlying vegetation, spurring endemism due to the presence of toxins (5, 6) and limiting productivity where rock-derived nutrients are scarce (7-9). However, lithologic effects on vegetation are generally considered secondary to climatic factors such as the length of the growing season and the amount of moisture available for plant growth (10). Here we show that bedrock composition can drive differences in vegetation on par with the systematic altitudinal differences found in mountains between their hot, dry foothills and cold, wet alpine summits.

Explanations for distinct adjacent ecosystems that extend across hilly landscapes typically point to differences in climate or land use. Here we document—within a similar climate—how contrasting regional plant communities correlate with distinct underlying lithology and reveal how differences in water storage capacity in the critical zone (CZ) explain this relationship. We present observations of subsurface CZ structure and groundwater dynamics from deep boreholes and quantify catchment‐wide dynamic water storage in two Franciscan rock types of the Northern California Coast Ranges. Our field sites have a Mediterranean climate, where rains are out of phase with solar energy, amplifying the importance of subsurface water storage for periods of peak ecosystem productivity in the dry season. In the deeply weathered (~30 m at ridge) Coastal Belt argillite and sandstone, ample, seasonally replenished rock moisture supports an evergreen forest and groundwater drainage sustains baseflow throughout the summer. In the Central Belt argillite‐matrix mélange, a thin CZ (~3 m at ridge) limits total dynamic water storage capacity (100–200 mm) and rapidly sheds winter rainfall via shallow storm and saturation overland flow, resulting in low plant‐available water (inferred from predawn tree water potential) and negligible groundwater storage that can drain to streams in summer. This storage limitation mechanism explains the presence of an oak savanna‐woodland bounded by seasonally ephemeral streams, despite >1,800 mm of average precipitation. Through hydrologic monitoring and subsurface characterization, we reveal a mechanism by which differences in rock type result in distinct regionally extensive plant communities under a similar climate.