Interkingdom signaling is established in the gastrointestinal tract in that human hormones trigger responses in bacteria; here, we show that the corollary is true, that a specific bacterial signal, indole, is recognized as a beneficial signal in intestinal epithelial cells. Our prior work has shown that indole, secreted by commensal Escherichia coli and detected in human feces, reduces pathogenic E. coli chemotaxis, motility, and attachment to epithelial cells. However, the effect of indole on intestinal epithelial cells is not known. Because intestinal epithelial cells are likely to be exposed continuously to indole, we hypothesized that indole may be beneficial for these cells, and investigated changes in gene expression with the human enterocyte cell line HCT-8 upon exposure to indole. Exposure to physiologically relevant amounts of indole increased expression of genes involved in strengthening the mucosal barrier and mucin production, which were consistent with an increase in the transepithelial resistance of HCT-8 cells. Indole also decreased TNF-α-mediated activation of NF-κB, expression of the proinflammatory chemokine IL-8, and the attachment of pathogenic E. coli to HCT-8 cells, as well as increased expression of the antiinflammatory cytokine IL-10. The changes in transepithelial resistance and NF-κB activation were specific to indole: other indole-like molecules did not elicit a similar response. Our results are similar to those observed with probiotic strains and suggest that indole could be important in the intestinal epithelial cells response to gastrointestinal tract pathogens.host-pathogen interactions | interkingdom signaling | probiotics T he human gastrointestinal (GI) tract is rich in a diverse range of signaling molecules. A wide range of bacterial signals (e.g., autoinducer-2, autoinducer-3, and indole) (1) are produced by the ∼10 14 nonpathogenic commensal bacteria that coexist with host cells in the GI tract, and neuroendocrine hormones (e.g., norepinephrine and dopamine) are also synthesized in situ in the GI tract via the enteric nervous system. The close proximity of bacteria and the host cells in the GI tract, as well as the high local concentrations of the signals they secrete, has led to a signalcentric paradigm wherein GI tract signals are considered to be important mediators of homeostasis and infections through intrakingdom (i.e., recognition of bacterial signals by other bacteria) and/or interkingdom (i.e., recognition of host signals by bacteria and vice versa) signaling and communication.

During infection in the gastrointestinal tract, enterohemorrhagic Escherichia coli (EHEC) O157:H7 is exposed to a wide range of signaling molecules, including the eukaryotic hormones epinephrine and norepinephrine, and bacterial signal molecules such as indole. Since these signaling molecules have been shown to be involved in the regulation of phenotypes such as motility and virulence that are crucial for EHEC infections, we hypothesized that these molecules also govern the initial recognition of the large intestine environment and attachment to the host cell surface. Here, we report that, compared to indole, epinephrine and norepinephrine exert divergent effects on EHEC chemotaxis, motility, biofilm formation, gene expression, and colonization of HeLa cells. Using a novel two-fluorophore chemotaxis assay, it was found that EHEC is attracted to epinephrine and norepinephrine while it is repelled by indole. In addition, epinephrine and norepinephrine also increased EHEC motility and biofilm formation while indole attenuated these phenotypes. DNA microarray analysis of surface-associated EHEC indicated that epinephrine/norepinephrine up-regulated the expression of genes involved in surface colonization and virulence while exposure to indole decreased their expression. The gene expression data also suggested that autoinducer 2 uptake was repressed upon exposure to epinephrine/ norepinephrine but not indole. In vitro adherence experiments confirmed that epinephrine and norepinephrine increased attachment to epithelial cells while indole decreased adherence. Taken together, these results suggest that epinephrine and norepinephrine increase EHEC infection while indole attenuates the process. The intestinal tract is colonized by approximately 1012 commensal bacteria consisting of hundreds of bacterial species, including the genus Escherichia (9, 10, 19). The introduction of pathogenic bacteria such as enterohemorrhagic Escherichia coli (EHEC) O157:H7 into the human gastrointestinal (GI) tract results in colonization of host cells and leads to the onset of bloody diarrhea and hemolytic uremic syndrome (24, 25). EHEC infections progress through a three-step mechanism, the first of which involves adhesion of bacteria to host cells and the formation of microcolonies (23,46). EHEC infections pose a serious clinical problem as they are often associated with complications and permanent disabilities, including neurological defects, hypertension, and renal insufficiency (35). Understanding the mechanisms underlying EHEC pathogenicity could lead to better approaches for attenuating the deleterious consequences associated with GI tract infections (52).E. coli O157:H7 is exposed to a wide range of signaling molecules in the GI tract. These include bacterial quorum-sensing molecules such as autoinducer 2 and 3 (AI-2 and AI-3, respectively) that are involved in the regulation of phenotypes crucial for virulence and infection (44, 49). For example, Sperandio et al. (43,44) have shown that the adhesion of pathogenic E. coli to host c...

Analysis of the temporal development of Escherichia coli K-12 biofilms in complex medium indicates the greatest differential gene expression between biofilm and suspension cells occurred in young biofilms at 4 and 7 h (versus 15 and 24 h). The main classes of genes differentially expressed (biofilm versus biofilm and biofilm versus suspension cells) include 42 related to stress response (e.g. cspABFGI), 66 related to quorum sensing (e.g. ydgG, gadABC, hdeABD), 20 related to motility (e.g. flgBCEFH, fliLMQR, motB), 13 related to fimbriae (e.g. sfmCHM, fimZ, csgC), 24 related to sulfur and tryptophan metabolism (e.g. trpLBA, tnaLA, cysDNCJH), 80 related to transport (e.g. gatABC, agaBC, ycjJ, ydfJ, phoU, phnCJKM), and six related to extracellular matrix (e.g. wcaBDEC). Of the 93 mutants identified and studied, 76 showed altered biofilm formation. Biofilm architecture changed from thin and dense to globular and dispersed to dense and smooth. The quorum-sensing signal AI-2 controls gene expression most clearly in mature biofilms (24 h) when intracellular AI-2 levels are highest. Sulfate transport and metabolism genes (cysAUWDN) and genes with unknown functions (ymgABCZ) were repressed in young (4, 7 h) biofilms, induced in developed biofilms (15 h), and repressed in mature (24 h) biofilms. Genes related to both motility and fimbriae were induced in biofilms at all sampling time points and colanic acid genes were induced in mature biofilms (24 h). Genes related to dihydroxyacetone phosphate synthesis from galactitol and galactosamine (e.g. gatZABCDR, agaBCY) were highly regulated in biofilms. Genes involved in the biosynthesis of indole and sulfide (tnaLA) are repressed in biofilms after 7 h (corroborated by decreasing intracellular indole concentrations in biofilms). Cold-shock protein transcriptional regulators (cspABFGI) appear to be positive biofilm regulators, and deletions in respiratory genes (e.g. hyaACD, hyfCG, appC, narG) increased biofilm formation sevenfold.

Since indole is present at up to 500 M in the stationary phase and is an interspecies biofilm signal (J. Lee, A. Jayaraman, and T. K. Wood, BMC Microbiol. 7:42, 2007), we investigated hydroxyindoles as biofilm signals and found them also to be nontoxic interspecies biofilm signals for enterohemorrhagic Escherichia coli O157:H7 (EHEC), E. coli K-12, and Pseudomonas aeruginosa. The genetic basis of EHEC biofilm formation was also explored, and notably, virulence genes in biofilm cells were repressed compared to those in planktonic cells. In Luria-Bertani medium (LB) on polystyrene with quiescent conditions, 7-hydroxyindole decreased EHEC biofilm formation 27-fold and decreased K-12 biofilm formation 8-fold without affecting the growth of planktonic cells. 5-Hydroxyindole also decreased biofilm formation 11-fold for EHEC and 6-fold for K-12. In contrast, isatin (indole-2,3-dione) increased biofilm formation fourfold for EHEC, while it had no effect for K-12. When continuous-flow chambers were used, confocal microscopy revealed that EHEC biofilm formation was reduced 6-fold by indole and 10-fold by 7-hydroxyindole in LB. Whole-transcriptome analysis revealed that isatin represses indole synthesis by repressing tnaABC 7-to 37-fold in EHEC, and extracellular indole levels were found to be 20-fold lower. Furthermore, isatin repressed the AI-2 transporters lsrABCDFGKR, while significantly inducing the flagellar genes flgABCDEFGHIJK and fliAEFGILMNOPQ (which led to a 50% increase in motility). 7-Hydroxyindole induces the biofilm inhibitor/stress regulator ycfR and represses cysADIJPU/fliC (which led to a 50% reduction in motility) and purBCDEFHKLMNRT. Isogenic mutants showed that 7-hydroxyindole inhibits E. coli biofilm through cysteine metabolism. 7-Hydroxyindole (500 M) also stimulates P. aeruginosa PAO1 biofilm formation twofold; therefore, hydroxyindoles are interspecies bacterial signals, and 7-hydroxyindole is a potent EHEC biofilm inhibitor.Procaryotes and eucaryotes signal not only themselves but also one another; hence, there is competition and interference of cell signals. For example, interference of acylhomoserine lactones (AHLs) is manifested by AHL lactonases and acylases, which are present in both gram-positive and gram-negative bacteria (79). Similarly, autoinducer-2 (AI-2), a furanosyl borate diester or derivative (39), may be manipulated by Escherichia coli and Vibrio harveyi to interfere with the ability of each species to assess changes in cell population (75). This competition extends beyond procaryotes, as eucaryotes manipulate the quorum-sensing signals of bacteria, too. For example, algae block bacterial biofilm formation via furanones by controlling both AHL signaling (25) and AI-2 signaling (52), and mammals (including humans) block AHL signaling via lactonase in sera (76). Analogously, bacteria take advantage of eucaryotic signals since enterohemorrhagic E. coli O157:H7 (EHEC) bacteria utilize the human hormones epinephrine and norepinephrine to activate virulence genes (33), and bacteria inter...

The autoinducer-2 (AI-2) molecule is produced by many bacterial species, including various human gastrointestinal (GI) tract commensal bacteria, and has been proposed to be involved in interspecies communication. Because pathogens are likely to encounter AI-2 in the GI tract, we studied the effects of AI-2 on various phenotypes associated with enterohemorrhagic Escherichia coli (EHEC) infections. AI-2 attracted EHEC in agarose plug chemotaxis assays and also increased swimming motility, as well as increased EHEC attachment to HeLa cells. The molecular basis underlying the stimulation of EHEC chemotaxis, motility, and colonization by AI-2 was investigated at the transcriptome level using DNA microarrays. We found that exposure to AI-2 altered the expression of 23 locus of enterocyte effacement (LEE) genes directly involved in the production of virulence determinants, as well as other genes associated with virulence (e.g., 46 flagellar/fimbrial genes, 24 iron-related genes), in a temporally defined manner. To our knowledge, this is the first study to report AI-2-mediated regulation of EHEC chemotaxis and colonization, as well as temporal regulation of EHEC transcriptome by AI-2. Our results suggest that AI-2 is an important signal in EHEC infections of the human GI tract.