No abstract

Resistance to Phytophthora palmivora was assessed in leaves and pods of 12 diverse cacao genotypes at the penetration and post-penetration stages of infection to determine the relationship of resistance between stages and sites of infection. Penetration resistance was based on the frequency of lesions, whereas lesion size was used as a measure of post-penetration resistance. We observed significant clonal differences for leaf and pod resistance at the two stages of infection. A poor correlation between resistance at the penetration and post-penetration stages in both leaves and pods indicated that these two forms of resistance are independent and governed by different mechanisms. Correlation between resistance of leaves and pods was not significant at the penetration stage, whereas that of post-penetration resistance was positive and significant. This shows that internal or tissue resistance is common between leaf and pod and indicates that leaf resistance at the post-penetration stage of infection could be used to predict pod resistance; however, resistance of leaves at the penetration stage cannot be used to predict penetration resistance in pods. A high positive correlation obtained between attached leaves and pods with their detached counterparts showed that detached organs can be used for the prediction of resistance in attached leaves and pods.

Suspected virus-like symptoms were observed in cacao plants in Trinidad during 1943, and the viruses associated with these symptoms were designated as strains A and B of cacao Trinidad virus (CTV). However, viral etiology has not been demonstrated for either phenotype. Total DNA was isolated from symptomatic cacao leaves exhibiting the CTV A and B phenotypes and subjected to Illumina HiSeq and Sanger DNA sequencing. Based on de novo assembly, two apparently full-length badnavirus genomes of 7,533 and 7,454 nucleotides (nt) were associated with CTV strain A and B, respectively. The Trinidad badnaviral genomes contained four open reading frames, three of which are characteristic of other known badnaviruses, and a fourth that is present in only some badnaviruses. Both badnaviral genomes harbored hallmark caulimovirus-like features, including a tRNA priming site, a TATA box, and a polyadenylation-like signal. Pairwise comparisons of the RT-RNase H region indicated that the Trinidad isolates share 57-71% nt sequence identity with other known badnaviruses. Based on the system for badnavirus species demarcation in which viruses with less than 80% nt sequence identity in the RT-RNase gene are considered members of separate species, these isolates represent two previously unidentified badnaviruses, herein named cacao mild mosaic virus and cacao yellow vein banding virus, making them the first cacao-infecting badnaviruses identified thus far in the Western Hemisphere.

The effects of host age, leaf number, host type (clone or seedling), pathogen spore concentration and incubation time on inoculation with Crinipellis perniciosa (witches' broom disease of cocoa) were studied in greenhouse experiments using susceptible cocoa genotypes. Three methods of inoculation (agar-drop, water-drop and spray) were also tested. An optimized inoculation method was selected and tested for its repeatability as well as its ability to discriminate between various levels of resistance to C. perniciosa in cocoa. The optimized method (350 000 viable basidiospores per mL, 60 h incubation, agar-drop technique) produced 100% infection repeatedly, on both clonal and seedling plants of a susceptible genotype. Seedling age (2-12 months) and leaf number did not significantly affect the percentage of plants with symptoms or broom characteristics. This method discriminated effectively between the various levels of resistance in 14 cocoa genotypes and is recommended as an inoculation method to identify levels of resistance in germplasm collections. Symptom severity was shown to be a better measure of resistance than infection success.

Twelve diverse cacao (Theobroma cacao) genotypes were assessed for pod resistance to Phytophthora palmivora at the penetration and post-penetration stages of infection using two inoculation methods. Correlation analysis between a number of pod characteristics (stomatal frequency, stomatal pore length, surface wax, thickness of exocarp/endocarp, hardness of exocarp/mesocarp, moisture content) and resistance indicated a strong relationship between resistance to lesion establishment (lesion frequency) and the joint effect of stomatal frequency and pore length. The epidermal impressions of the pod surfaces bearing germinating zoospores of P. palmivora provided evidence that penetration occurs through stomata, epidermal hair base, scar and by direct penetration. A poor correlation was obtained between the pod characteristics studied and post-penetration resistance, suggesting that this resistance, assessed by lesion size, is not governed by morphological or physical characteristics of the pod, but probably by biochemical factors. The importance of these findings in breeding of cacao for resistance to P. palmivora is discussed.