Several plant species require microbial associations for survival under different biotic and abiotic stresses. In this study, we show that Enterobacter sp. SA187, a desert plant endophytic bacterium, enhances yield of the crop plant alfalfa under field conditions as well as growth of the model plant Arabidopsis thaliana in vitro, revealing a high potential of SA187 as a biological solution for improving crop production. Studying the SA187 interaction with Arabidopsis, we uncovered a number of mechanisms related to the beneficial association of SA187 with plants. SA187 colonizes both the surface and inner tissues of Arabidopsis roots and shoots. SA187 induces salt stress tolerance by production of bacterial 2-keto-4-methylthiobutyric acid (KMBA), known to be converted into ethylene. By transcriptomic, genetic and pharmacological analyses, we show that the ethylene signaling pathway, but not plant ethylene production, is required for KMBA-induced plant salt stress tolerance. These results reveal a novel molecular communication process during the beneficial microbe-induced plant stress tolerance.

Plant growth-promoting bacteria (PGPB) are known to increase plant tolerance to several abiotic stresses, specifically those from dry and salty environments. In this study, we examined the endophyte bacterial community of five plant species growing in the Thar desert of Pakistan. Among a total of 368 culturable isolates, 58 Bacillus strains were identified from which the 16 most divergent strains were characterized for salt and heat stress resilience as well as antimicrobial and plant growth-promoting (PGP) activities. When the 16 Bacillus strains were tested on the non-host plant Arabidopsis thaliana, B. cereus PK6-15, B. subtilis PK5-26 and B. circulans PK3-109 significantly enhanced plant growth under salt stress conditions, doubling fresh weight levels when compared to uninoculated plants. B. circulans PK3-15 and PK3-109 did not promote plant growth under normal conditions, but increased plant fresh weight by more than 50% when compared to uninoculated plants under salt stress conditions, suggesting that these salt tolerant Bacillus strains exhibit PGP traits only in the presence of salt. Our data indicate that the collection of 58 plant endophytic Bacillus strains represents an important genomic resource to decipher plant growth promotion at the molecular level.

Biochar is gaining significant attention due to its potential for carbon (C) sequestration, improvement of soil health, fertility enhancement, and crop productivity and quality. In this review, we discuss the most common available techniques for biochar production, the main physiochemical properties of biochar, and its effects on soil health, including physical, chemical, and biological parameters of soil quality and fertility, nutrient leaching, salt stress, and crop productivity and quality. In addition, the impacts of biochar addition on salt-affected and heavy metal contaminated soils were also reviewed. An ample body of literature supports the idea that soil amended with biochar has a high potential to increase crop productivity due to the concomitant improvement in soil structure, high nutrient use efficiency (NUE), aeration, porosity, and water-holding capacity (WHC), among other soil amendments. However, the increases in crop productivity in biochar-amended soils are most frequently reported in the coarse-textured and sandy soils compared with the fine-textured and fertile soils. Biochar has a significant effect on soil microbial community composition and abundance. The negative impacts that salt-affected and heavy metal polluted soils have on plant growth and yield and on components of soil quality such as soil aggregation and stability can be ameliorated by the application of biochar. Moreover, most of the positive impacts of biochar application have been observed when biochar was applied with other organic and inorganic amendments and fertilizers. Biochar addition to the soil can decrease the nitrogen (N) leaching and volatilization as well as increase NUE. However, some potential negative effects of biochar on microbial biomass and activity have been reported. There is also evidence that biochar addition can sorb and retain pesticides for long periods of time, which may result in a high weed infestation and control cost.

Global warming has become a critical challenge to food security, causing severe yield losses of major crops worldwide. Conventional and transgenic breeding strategies to enhance plant thermotolerance are laborious and expensive. Therefore, the use of beneficial microbes could be an alternative approach. Here, we report that the root endophyte Enterobacter sp. SA187 induces thermotolerance in wheat in the laboratory as well as in open‐field agriculture. To unravel the molecular mechanisms, we used Arabidopsis thaliana as model plant. SA187 reprogramed the Arabidopsis transcriptome via HSFA2‐dependent enhancement of H3K4me3 levels at heat stress memory gene loci. Unlike thermopriming, SA187‐induced thermotolerance is mediated by ethylene signaling via the transcription factor EIN3. In contrast to the transient chromatin modification by thermopriming, SA187 induces constitutive H3K4me3 modification of heat stress memory genes, generating robust thermotolerance in plants. Importantly, microbial community composition of wheat plants in open‐field agriculture is not influenced by SA187, indicating that beneficial microbes can be a powerful tool to enhance thermotolerance of crops in a sustainable manner.