By combining atomic force microscopy and trans-port measurements, we systematically investigated effects of thermal annealing on surface morphologies and electrical properties of single-layer graphene devices fabricated by electron beam lithography on silicon oxide (SiO(2)) substrates. Thermal treatment above 300 °C in vacuum was required to effectively remove resist residues on graphene surfaces. However, annealing at high temperature was found to concomitantly bring graphene in close contact with SiO(2) substrates and induce increased coupling between them, which leads to heavy hole doping and severe degradation of mobilities in graphene devices. To address this problem, a wet-chemical approach employing chloroform was developed in our study, which was shown to enable both intrinsic surfaces and enhanced electrical properties of graphene devices. Upon the recovery of intrinsic surfaces of graphene, the adsorption and assisted fibrillation of amyloid β-peptide (Aβ1-42) on graphene were electrically measured in real time.
We report enhanced performance of suspended graphene field effect transistors (Gra-FETs) as sensors in aqueous solutions. Etching of the silicon oxide (SiO(2)) substrate underneath graphene was carried out in situ during electrical measurements of devices, which enabled systematic comparison of transport properties for same devices before and after suspension. Significantly, the transconductance of Gra-FETs in the linear operating modes increases 1.5 and 2 times when the power of low-frequency noise concomitantly decreases 12 and 6 times for hole and electron carriers, respectively, after suspension of graphene in solution from the SiO(2) substrate. Suspended graphene devices were further demonstrated as direct and real-time pH sensors, and complementary pH sensing with the same nanodevice working as either a p-type or n-type transistor was experimentally realized by offsetting the electrolyte gate potential in solution. Our results highlight the importance to quantify fundamental parameters that define resolution of graphene-based bioelectronics and demonstrate that suspended nanodevices represent attractive platforms for chemical and biological sensors.
SUMMARY
Dynamic regulation of histone methylation represents a fundamental epigenetic mechanism underlying eukaryotic gene regulation, yet little is known about how the catalytic activities of histone demethylases are regulated. Here, we identify and characterize NPAC/GLYR1 as an LSD2/KDM1b-specific cofactor that stimulates H3K4me1 and H3K4me2 demethylation. We determine the crystal structures of LSD2 alone and LSD2 in complex with the NPAC linker region in the absence or presence of histone H3 peptide, at resolutions of 2.9, 2.0, and 2.25 Å, respectively. These crystal structures and further biochemical characterization define a dodecapeptide of NPAC (residues 214–225) as the minimal functional unit for its cofactor activity and provide structural determinants and a molecular mechanism underlying the intrinsic cofactor activity of NPAC in stimulating LSD2-catalyzed H3K4 demethylation. Thus, these findings establish a model for how a cofactor directly regulates histone demethylation and will have a significant impact on our understanding of catalytic-activity-based epigenetic regulation.
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