Summary The extent of DMSP demethylation has been hypothesized to depend on DMSP availability and bacterial sulfur demand, which might lead to niche differentiation of the demethylating bacterial community. In this study, we determined DMSP concentrations in marine snow and the ambient water over a seasonal cycle and linked DMSP concentrations to the abundance of bacteria harbouring the demethylation dmdA gene in the Adriatic Sea. In marine snow, DMSP concentrations were up to four times higher than in the ambient water and three times higher in marine snow in summer than in winter. The average dmdA:recA gene ratio over the sampling period was 0.40 ± 0.24 in marine snow and 0.48 ± 0.21 in the ambient water. However, at the subclade level, differences in the demethylating bacterial community of marine snow and the ambient water were apparent. Seasonal patterns of potentially demethylating bacteria were best visible at the oligotype level. In the ambient water, the SAR116 and the OM60/NOR5 clade were composed of oligotypes that correlated to high DMSP concentrations, while oligotypes of the Rhodospirillales correlated to low DMSP concentrations. Our results revealed a pronounced seasonal variability and spatial heterogeneity in DMSP concentrations and the associated demethylating bacterial community.
The coastal North Sea is characterized by strong seasonal dynamics in abiotic and biotic variables. Hence, pronounced temporal changes in the bacterioplankton community composition can be expected. Catalyzed reporter deposition fluorescence in situ hybridization analysis showed a seasonal succession, with Alphaproteobacteria dominating before the spring phytoplankton bloom, Bacteroidetes increasing during the bloom (up to 60% of the prokaryotic community) and being replaced by Gammaproteobacteria during the postbloom period (on average 30% of prokaryotic cells). Daily changes in similarity of the bacterioplankton community assessed by Terminal Restriction Fragment Length Polymorphism averaged 0.08 day−1 (Whittaker similarity index) for the free-living bacterial community, resulting in a decreasing similarity between samples with increasing time up to approximately 150 days. After about 150 days, the community composition became increasingly similar to the initial composition. Changes in the bacterial community showed periods of fairly stable composition, interrupted by periods of rapid changes. Taken together, our results support the notion of a recurring bacterioplankton community in the coastal North Sea and indicate a tight coupling between the resources, the bacterial community metabolism, physiological structure and community composition throughout the seasonal cycle in the coastal North Sea.
Summary Messenger RNA can provide valuable insights into the variability of metabolic processes of microorganisms. However, due to uncertainties that include the stability of RNA, its application for activity profiling of environmental samples is questionable. We explored different factors affecting the decay rate of transcripts of three marine bacterial isolates using qPCR and determined mRNA half‐life time of specific bacterial taxa and of functional genes by metatranscriptomics of a coastal environmental prokaryotic community. The half‐life time of transcripts from 11 genes from bacterial isolates ranged from 1 to 46 min. About 80% of the analysed transcripts exhibited half‐live times shorter than 10 min. Significant differences were found in the half‐life time between mRNA and rRNA. The half‐life time of mRNA obtained from a coastal metatranscriptome ranged from 9 to 400 min. The shortest half‐life times of the metatranscriptome corresponded to transcripts from the same clusters of orthologous groups (COGs) in all bacterial classes. The prevalence of short mRNA half‐life time in genes related to defence mechanisms and motility indicate a tight connection of RNA decay rate to environmental stressors. The short half‐life time of RNA and its high variability needs to be considered when assessing metatranscriptomes especially in environmental samples.
Seasonal changes of microbial abundance and associated extracellular enzymatic activity in marine snow and in seawater were studied in the northern Adriatic during a three year period. Marine snow was present during the entire investigated period, although with higher concentrations during summer than during winter. Microorganisms densely colonized marine snow and aggregate-associated enzymatic activity was substantially higher (up to 10 5 times) than in seawater. Alkaline phosphatase activity (APA) and aminopeptidase activity in marine snow showed seasonal variation with higher activities in late spring-summer than in autumn-winter, probably in response to changes in the quantity and quality of organic matter.The highest cell-specific bacterial activity was found for phosphatase, followed by peptidase, and the lowest for glucosidases. Differential hydrolysis of marine snow-derived organic matter points to the well-known P-limitation of the northern Adriatic and indicates preferential utilization of phosphorus-and nitrogen-rich organic compounds by microbes, while hydrolysis of polysaccharides seemed to be less important. In oligotrophic conditions during summer, organic matter released from marine snow might represent a significant source of substrate for free-living bacteria in seawater. For the first time microorganisms producing APA in marine snow were identified revealing that dense populations of bacteria expressed APA, while cyanobacteria did not. Cyanobacteria proliferating in marine snow could benefit from phosphorus release by bacteria and nanoflagellates.
Polybenzimidazoles (PBI) are heterocyclic polymers which are known for their outstanding thermal and chemical stability. Hoechst Celanese has recently developed PBI (2,2'-(m-phenylene)-5,5'-bibenzimidazole) as an engineering plastic with the trade name CelazoleTM. The polymer has excellent compressive strength, high tensile strength and modulus, and a glass transition temperature of 425°C. Low molecular weight, oligomeric forms of PBI have been used in the past as a composite matrix material. The prepregs produced were stiff and board-like at ambient temperature. In addition, in situ polymerization resulted in large amounts of condensation by-products (phenol and water) which meant that high pressure curing conditions were needed to minimize voids. More recently, medium molecular weight PBI (12 000-20 000 g molweight average) has been used in combination with NN-dimethylacetamide (DMAc) solvent to produce prepregs with excellent tack and drape. These prepregs have significantly reduced condensation by-products, resulting in improved processability and properties. Reported in this article are polymer modifications which enhance the ability to cure PBI prepreg at standard autoclave pressures and have the added benefit of improved high temperature composite properties.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
hi@scite.ai
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.