Geographic location and connected environmental and edaphic factors like temperature, rainfall, soil type, and composition influence the presence and the total content of specific plant compounds as well as the presence of a certain chemotype. This study evaluated whether geographic, edaphic, and climatic information can be utilized to predict the presence of specific compounds from medicinal or aromatic plants. Furthermore, we tested rapid analytical methods based on near infrared spectroscopy (NIR) coupled with gas chromatography/flame ionization (GC/FID) and gas chromatography/mass spectrometry (GC/MS) analytical methods for characterization and classification metabolite profiling of Zataria multiflora Boiss. populations. Z. multiflora is an aromatic, perennial plant with interesting pharmacological and biological properties. It is widely dispersed in Iran as well as in Pakistan and Afghanistan. Here, we studied the effect of environmental factors on essential oil (EO) content and the composition and distribution of chemotypes. Our results indicate that this species grows predominantly in areas rich in calcium, iron, potassium, and aluminum, with mean rainfall of 40.46 to 302.72 mm•year −1 and mean annual temperature of 14.90°C to 28.80°C. EO content ranged from 2.75% to 5.89%. Carvacrol (10.56-73.31%), thymol (3.51-48.12%), linalool (0.90-55.38%), and pcymene (1.66-13.96%) were the major constituents, which classified 14 populations into three chemotypes. Corresponding to the phytochemical cluster analysis, the hierarchical cluster analysis (HCA) based on NIR data also recognized the carvacrol, thymol, and linalool chemotypes. Hence, NIR has the potential to be applied as a useful tool to determine rapidly the chemotypes of Z. multiflora and similar herbs. EO and EO constituent content correlated with different geographic location, climate, and edaphic factors. The structural equation models (SEMs) approach revealed direct effects of soil factors (texture, phosphor, pH) and mostly indirect effects of latitude and altitude directly

Environmental factors shape the production and accumulation processes of plant secondary metabolites in medical and aromatic plants and thus their pharmacological and biological activity. Using an environmental metabolomics approach, we determined chemotypes and specific compounds on the basis of essential oils (EOs) from roots of 10 Iranian Ferula assa-foetida L. populations and related them to geographical, climate, and edaphic data. GC–MS revealed three distinct chemotypes characterized by (I) monoterpenes and Z-1-propenyl sec-butyl disulfide; (II) eudesmane sesquiterpenoids and α-agarofuran; and (III) Z- and E-1-propenyl sec-butyl disulfide. NIRS measurements indicated a similar but less distinct pattern. Structural equation models showed that EO constituents and content were directly influenced by edaphic factors (texture, pH, and iron, potassium, and aluminum content) and temperature and predominantly indirectly by latitude, longitude, and altitude. Predicting EO constituents or chemotypes by geographical, climate, and soil factors can be used in F. assa-foetida to select populations with specific EO characteristics.

Aims Cropland agroforestry systems are land-use systems with numerous environmental advantages over monoculture croplands including promotion of soil life. This study aimed to investigate tree-species and tree-distance effects on soil biota in a temperate agroforestry system. Methods Our study was conducted at a paired alley-cropping and monoculture cropland system. The tree rows of the agroforestry system comprised of blocks of poplar Fritzi Pauley, poplar Max 1 or black locust. Within the agroforestry system, soil microbial and earthworm communities were collected along transects spanning from the center of the tree rows into the crop rows. Archaea, bacteria, and fungi were quantified using real-time PCR. The community composition of fungi and earthworms was deciphered using amplicon sequencing and morphological identification, respectively. Results Tree rows promoted the abundance of bacteria and earthworms, which we attribute mainly to tree litter input and the absence of tillage. Fungal community composition was altered by the tree rows, resulting in an increased proportion of ectomycorrhizal fungi in the tree-row associated mycobiome. The proportion of Blumeria graminis, the causal agent of powdery mildew, increased with increasing distance from the trees. We suggest that enhanced microbial antagonism, increased earthworm densities and/or altered microclimate contributed to the suppression of B. graminis in vicinity of the trees. Tree-species effect had a minor influence on the abundance and composition of soil communities at our study site. Conclusions In comparison to monoculture cropland, agroforestry benefits the abundance, diversity, and function of soil biota and may enhance soil suppressiveness.

Aims Incorporation of flower strips is an agricultural measure to increase aboveground biodiversity and ecosystem services. Although soil communities are key components of terrestrial biodiversity and drive important ecosystem services, their abundance, diversity, and composition in flower strips remain largely unexplored. Here, we shed light on earthworms and soil microorganisms in flower strips. Methods We sowed a grassy field margin vegetation as well as two annual and two perennial flower strip mixtures in fully randomized plots of 9 × 28 m in three different types of soil in Germany. Two years following sowing, we determined earthworm communities using chemical extraction and investigated the soil microbiome using real-time PCR (archaea, bacteria, fungi, and soil-N-cycling genes) and amplicon sequencing (bacteria and fungi). Results Different plant mixtures (i.e. field margin, annual and perennial flower strips) harbored distinct earthworm and soil microbial communities. Earthworm density and biomass declined or remained unaffected in annual flower strips but increased in perennial flower strips as compared to the field margins. Arbuscular mycorrhizal fungi showed greater diversity and relative abundance in non-tilled (i.e. field margin and perennial flower strips) than in tilled plant mixtures (i.e. annual flower strips). Conclusions We attribute changes in earthworm and microbial communities mainly to the effect of tillage and plant diversity. Overall, we suggest that perennial flower strips serve as refugia. Future studies should compare soil biota in perennial flower strips to those in adjacent fields and investigate whether the promotion of soil communities extends into adjacent fields (‘spillover’).

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