RNA is a linear polymer of nucleotides linked by a ribose-phosphate backbone. Polymerization of nucleotides occurs in a condensation reaction in which phosphodiester bonds are formed. However, in the absence of enzymes and metabolism there has been no obvious way for RNA-like molecules to be produced and then encapsulated in cellular compartments. We investigated 5′-adenosine monophosphate (AMP) and 5′-uridine monophosphate (UMP) molecules confined in multi-lamellar phospholipid bilayers, nanoscopic films, ammonium chloride salt crystals and Montmorillonite clay, previously proposed to promote polymerization. X-ray diffraction was used to determine whether such conditions imposed a degree of order on the nucleotides. Two nucleotide signals were observed in all matrices, one corresponding to a nearest neighbour distance of 4.6 Å attributed to nucleotides that form a disordered, glassy structure. A second, smaller distance of 3.4 Å agrees well with the distance between stacked base pairs in the RNA backbone, and was assigned to the formation of pre-polymers, i.e., the organization of nucleotides into stacks of about 10 monomers. Such ordering can provide conditions that promote the nonenzymatic polymerization of RNA strands under prebiotic conditions. Experiments were modeled by Monte-Carlo simulations, which provide details of the molecular structure of these pre-polymers.
This work has undergone a double-blind review by a minimum of two faculty members from institutions of higher learning from around the world. The faculty reviewers have expertise in disciplines closely related to those represented by this work. If possible, the work was also reviewed by undergraduates in collaboration with the faculty reviewers. AbstractAphids and other herbivorous insects are able to travel between plants in their environment. While plants cannot directly choose their consumers, they may stop or mitigate the harmful effects of herbivory using secondary metabolites. A salicylic acid (SA) pathway facilitates defense from biotrophic fungi and some necrotrophic pathogens, while a jasmonic acid ( JA) pathway is associated with defense from other necrotrophic pathogens and chewing insects. We investigated the effect of deficiency in SA or JA in Arabidopsis thaliana on plant growth and on herbivory by green peach aphids (Myzus persicae). Three ascensions of A. thaliana were placed in two blocks with three aphids on each individual. The genotypes consisted of a SA-deficient ascension (Sid2), a JA-deficient ascension (Lox2), and a wild type (Col). Wildtype A. thaliana showed significantly greater growth relative to the other ascensions, suggesting better performance, as well as dramatically higher aphid count. Aphid count showed a significant positive correlation with plant growth, suggesting that M. persicae is attracted to signs of growth in A. thaliana, or reproduces more on growing plants. It appears that wild-type plants showed greater growth throughout the experiment, and were thus targeted by the highly responsive M. persicae. This behaviour may be exploited for agricultural purposes; herbivorous insects may be diverted to fast-growing trap crops lacking agricultural value in order to protect primary crops.
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