Stable isotope analysis (SIA) has emerged as a common tool in ecology and has proven especially useful in the study of animal diet, habitat use, movement, and physiology. SIA has been vigorously applied to the study of marine mammals, because most species live in habitats or undergo large migrations/movements that make them difficult to observe. Our review supplies a complete list of published SIA contributions to marine mammal science and highlights informative case examples in four general research areas: (1) physiology and fractionation, (2) foraging ecology and habitat use, (3) ecotoxicology, and (4) historic ecology and paleoecology. We also provide a condensed background of isotopic nomenclature, highlight several physiological considerations important for accurate interpretation of isotopic data, and identify research areas ripe for future growth. Because it is impossible to conduct controlled laboratory experiments on most marine mammal species, future studies in marine mammal ecology must draw on isotopic data collected from other organisms and be cognizant of key assumptions often made in the application of SIA to the study of animal ecology. The review is designed to be accessible to all audiences, from students unfamiliar with SIA to those who have utilized it in published studies.

Although the first ten million years of whale evolution are documented by a remarkable series of fossil skeletons, the link to the ancestor of cetaceans has been missing. It was known that whales are related to even-toed ungulates (artiodactyls), but until now no artiodactyls were morphologically close to early whales. Here we show that the Eocene south Asian raoellid artiodactyls are the sister group to whales. The raoellid Indohyus is similar to whales, and unlike other artiodactyls, in the structure of its ears and premolars, in the density of its limb bones and in the stable-oxygen-isotope composition of its teeth. We also show that a major dietary change occurred during the transition from artiodactyls to whales and that raoellids were aquatic waders. This indicates that aquatic life in this lineage occurred before the origin of the order Cetacea.

We analyzed the carbon and oxygen isotope composition of tooth enamel from mammals inhabiting marine and terrestrial ecosystems to determine whether these stable isotopes were robust indicators of foraging and habitat preferences. Consumers were separated into six habitats (offshore, nearshore, kelp beds, estuarine, freshwater, terrestrial). Consumer δC values were correlated with the δC values of primary producers within each habitat, suggesting that δC values of tooth enamel are a viable proxy for foraging zones. Offshore and terrestrial consumer δC values were not significantly different, however, indicating that carbon isotope analysis alone is not sufficient to distinguish foraging within these two ecosystems. We propose that oxygen isotopes can be used along with δC values to further clarify habitat use. Oxygen isotopes were assessed as an indicator of habitat use. Consumers were grouped into four categories: aquatic-marine, aquatic-estuarine, aquatic-freshwater, and terrestrial. Populations of aquatic taxa had significantly lower standard deviations for δO values than those of terrestrial taxa. Mean δO values of aquatic taxa were significantly different among groups, but surprisingly, the mean values for freshwater taxa were higher than those for marine taxa. We conclude that variation in δO values of mammalian populations is a valid indicator of aquatic habits, but that mean δO values should be utilized with caution when trying to discriminate between marine and freshwater habitat use. Together, δC and δO values serve as valuable tools for identifying foraging and habitat preferences in modern marine and terrestrial ecosystems, and may provide similar information on ancient ecosystems.

Climate strongly affects the production of sediment from mountain catchments as well as its transport and deposition within adjacent sedimentary basins. However, identifying climatic influences on basin stratigraphy is complicated by nonlinearities, feedback loops, lag times, buffering and convergence among processes within the sediment routeing system. The Palaeocene/Eocene thermal maximum (PETM) arguably represents the most abrupt and dramatic instance of global warming in the Cenozoic era and has been proposed to be a geologic analogue for anthropogenic climate change. Here we evaluate the fluvial response in western Colorado to the PETM. Concomitant with the carbon isotope excursion marking the PETM we document a basin-wide shift to thick, multistoried, sheets of sandstone characterized by variable channel dimensions, dominance of upper flow regime sedimentary structures, and prevalent crevasse splay deposits. This progradation of coarse-grained lithofacies matches model predictions for rapid increases in sediment flux and discharge, instigated by regional vegetation overturn and enhanced monsoon precipitation. Yet the change in fluvial deposition persisted long after the approximately 200,000-year-long PETM with its increased carbon dioxide levels in the atmosphere, emphasizing the strong role the protracted transmission of catchment responses to distant depositional systems has in constructing large-scale basin stratigraphy. Our results, combined with evidence for increased dissolved loads and terrestrial clay export to world oceans, indicate that the transient hyper-greenhouse climate of the PETM may represent a major geomorphic 'system-clearing event', involving a global mobilization of dissolved and solid sediment loads on Earth's surface.

Isotopic studies of palaeoecological and ecological questions often use bone collagen or bioapatite as substrates, but rarely both. Substantial new information can be gained from the incorporation of isotopic values from both the organic and inorganic fractions of bone. Here we show that combining isotopic data from both substrates provides valuable and unique insights into (1) trophic relationships and dietary interactions; (2) differences in digestive physiologies and (3) identification of palaeontological or archaeological remains that lack diagnostic morphological characters. We present a range of new isotopic data collected from modern and fossil mammals, and investigate patterns within several published datasets. We define carbon isotope spacing variables, and then explore four diverse palaeoecological and ecological case studies.