Summary Climate change‐related soil salinization increases plant stress and decreases productivity. Soil microorganisms are thought to reduce salt stress through multiple mechanisms, so diverse assemblages could improve plant growth under such conditions. Previous studies have shown that microbiome selection can promote desired plant phenotypes, but with high variability. We hypothesized that microbiome selection would be more consistent in saline soils by increasing potential benefits to the plants. In both salt‐amended and untreated soils, we transferred forward Brassica rapa root microbiomes (from high‐biomass or randomly selected pots) across six planting generations while assessing bacterial (16S rRNA) and fungal (ITS) composition in detail. Uniquely, we included an add‐back control (re‐adding initial frozen soil microbiome) as a within‐generation reference for microbiome and plant phenotype selection. We observed inconsistent effects of microbiome selection on plant biomass across generations, but microbial composition consistently diverged from the add‐back control. Although salt amendment strongly impacted microbial composition, it did not increase the predictability of microbiome effects on plant phenotype, but it did increase the rate at which microbiome selection plateaued. These data highlight a disconnect in the trajectories of microbiomes and plant phenotypes during microbiome selection, emphasizing the role of standard controls to explain microbiome selection outcomes.
Microbial experimental systems provide a platform to observe how networks of groups emerge to impact plant development. We applied selection pressure for microbiome enhancement of Brassica rapa biomass to examine adaptive bacterial group dynamics under soil nitrogen limitation. In the 9th and final generation of the experiment, selection pressure enhanced B. rapa seed yield and nitrogen use efficiency compared to our control treatment, with no effect between the random selection and control treatments. Aboveground biomass increased for both the high biomass selection and random selection plants. Soil bacterial diversity declined under high B. rapa biomass selection, suggesting a possible ecological filtering mechanism to remove bacterial taxa. Distinct sub-groups of interactions emerged among bacterial phyla such as Proteobacteria and Bacteroidetes in response to selection. Extended Local Similarity Analysis and NetShift indicated greater connectivity of the bacterial community, with more edges, shorter path lengths, and altered modularity through the course of selection for enhanced plant biomass. In contrast, bacterial communities under random selection and no selection showed less complex interaction profiles of bacterial taxa. These results suggest that group-level bacterial interactions could be modified to collectively shift microbiome functions impacting the growth of the host plant under soil nitrogen limitation.
Because of public concern about exposing children to pesticides, legislation restricting its use on school playing fields has increased. One way to manage weeds without chemical herbicides is overseeding or the practice of repetitively seeding with a rapidly germinating turfgrass species. Overseeding for broadleaf weed control was tested on eight fields in Central New York (CNY) for three seasons and 40 fields across the northeastern United States for two seasons. Half of each field was treated each season by overseeding Lolium perenne L. (perennial ryegrass) three to five times each season for a total of 731 kg seed/ha (15 lb per 1000 ft2). Changes in the percent broadleaf weeds, grass, bare ground, soil moisture, Dark Green Color Index (DGCI) of grass cover, depth to soil compaction, and shear strength were measured after each treatment. The percent broadleaf weeds decreased and the percent grass cover increased due to overseeding in the Northeast fields, but not in CNY fields. Depth to compaction, percent soil moisture, and shear strength varied over time in the Northeast fields, and the percent bare ground, DGCI, and soil moisture varied over time in CNY fields. DGCI in the Northeast and soil compaction in CNY were affected by the interaction of overseeding × time. Although overseeding can be a beneficial weed management tool and affect other turf and soil traits in an integrated turf management program, monitoring environmental conditions and supporting field maintenance routines are critical weed management strategies for maintaining healthy turfgrass.
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