The diphtheria toxin repressor (DtxR) fromCorynebacterium diphtheriue is a divalent-metal activated repressor of chromosomal genes responsible for siderophore-mediated ironuptake and of a gene on several corynebacteriophages that encodes diphtheria toxin. Even though DtxR is the best characterized irondependent repressor to date, numerous key properties of the protein still remain to be explained. One is the role of the cation-anion pair discovered in its first metal-binding site. A second is the reason why zinc exhibits its activating effect only at a concentration 100-fold higher than other divalent cations.In the presently reported 1.85 8, resolution Co-DtxR structure at 100K, the sulfate anion in the cation-anion-binding site interacts with three side chains that are all conserved in the entire DtxR family, which points to a possible physiological role of the anion.A comparison of the 1.85 8, Cobalt-DtxR structure at lOOK and the 2.4 8, Zinc-DtxR structure at room temperature revealed no significant differences. Hence, the difference in efficiency of Co2+ and Zn2+ to activate DtxR remains a mystery and might be hidden in the propexties of the intriguing second metal-binding site. Our studies do, however, provide a high resolution view of the cationanion-binding site that has most likely evolved to interact not only with a cation but also with the anion in a very precise manner.Keywords: Corynebacterium diphtheriue; diphtheria toxin repressor; metal-activated repressor; X-ray crystal structure All pathogenic bacteria encounter iron-deficient growth conditions in vivo as most of the iron in the host is sequestered by iron-and
Iron dependent regulatory proteins of the diphtheria toxin repressor family regulate transcription in a variety of bacterial species. These regulators have three domains. Domains 1 and 2 are required for DNA- and metal-binding while the role of the third domain is only partially defined. We compared full-length and carboxyl-terminally truncated variants of Corynebacterium diphtheriae DtxR and Mycobacterium tuberculosis IdeR for recognition by antibodies, DNA binding, and repressor activity. The third domain of DtxR contains immunodominant epitopes and is required for full repressor activity in an Escherichia coli reporter system, but it is not required for binding to DNA in vitro. In contrast, the third domain of IdeR is required both for full DNA binding activity in vitro and for repressor activity in vivo. DtxR and IdeR differ significantly in their requirements for domain 3 for DNA-binding and repressor activity.
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