MotivationThe BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene.Main types of variables includedThe database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record.Spatial location and grainBioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1,000,000,000,000 cm2).Time period and grainBioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year.Major taxa and level of measurementBioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates.Software format.csv and .SQL.
The PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)—has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.
Diversity and similarity of butterfly communities were assessed in five different habitat types (from natural closed forest to agricultural lands) in the mountains of Tam Dao National Park, Vietnam for 3 years from 2002 to 2004. The line transect count was used to record species richness and abundance of butterfly communities in the different habitat types. For each habitat, the number of species and individuals, and indices of species richness, evenness and diversity of butterfly communities were calculated. The results indicated that species richness and abundance of butterfly communities were low in the natural closed forest, higher in the disturbed forest, highest in the forest edge, lower in the shrub habitat and lowest in the agricultural lands. The indices of species richness, evenness and diversity of butterfly communities were low in agricultural lands and natural closed forest but highest in the forest edge and shrub habitats. The families Satyridae and Amathusiidae have the greatest species richness and abundance in the natural closed forest, with a reduction in their species richness and abundance from the natural closed forest to the agricultural lands. Species composition of butterfly communities was different among five different habitat types (40%), was similar in habitats outside the forest (68%) and was similar in habitats inside the forest (63%). Diversity and abundance of butterfly communities are not different between the natural closed forest and the agriculture lands, but species composition changed greatly between these habitat types. A positive correlation between the size of species geographical distribution range and increasing habitat disturbance was found. The most characteristic natural closed forest species have the smallest geographical distribution range.
A total of 112 species with 1703 individuals of Papilionoidae (except Lycaenidae) were recorded. The proportion of rare species tends to decrease from the natural forest to the stream sides, while the proportion of common species tends to increase from the natural forest to the stream sides. The stream sides have the greatest individual number, while the disturbed forest contains the greatest species number. The bamboo forest has the least species and individual numbers. The stream side environment in the forest plays an important role in conserving butterfly abundance while the bamboo shows the poorest butterfly diversity.
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