endo-cis-(2S,3R)-Bicyclo[2.2.1]hept-5-en (norbornene) dicarbonyl unit with a built-in U-architecture
has been demonstrated to be an excellent reverse-turn molecular scaffold. A large variety of endo-cis-(2S,3R)-norborneno bispeptides containing almost all of the coded amino acids were synthesized and examined for
conformational preferences by 1H NMR, FT-IR, CD, and X-ray crystallographic studies. While FT-IR and
1H NMR variable-temperature studies ruled out the presence of any significant amount of intramolecular
hydrogen bonding in simple bispeptides (3a
−
h) (except in Aib bispeptide), the CD studies were clearly in
favor of a β-turn type structure. Single-crystal X-ray studies on Aib, Val and Leu containing norborneno
bispeptides (3b−d) provided convincing proof for the presence of reverse-turn conformation. While the
interstrand Cα−Cα‘ distances (5.2−5.7 Å) were well within the range of those for β-turn structures, no interstrand
intramolecular hydrogen bonding was seen in Val and Leu bispeptides; the Aib bispeptide forms a seven-membered hydrogen-bonded ring, thus, showing that the norbornene (2S,3R)-dicarbonyl template assembles
peptide chains in reverse-turn conformation by virtue of its built-in U-shaped architecture at these positions,
and hydrogen bonding may not be necessary to stabilize the turn structure. The endo-cis-(2S,3R) orientation
of bispeptide chains is essential for turn structure as shown by the crystal structure of trans-(2R, 3R) and
trans-(2S,3S) derivative of Val bispeptide wherein the two peptide chains move away from each other with
the Cα−Cα‘ distance increasing to 7.1−8.2 Å. The norbornene 5,6-double bond was hydrogenated to 5,6-dihydro derivative which showed almost the same CD spectrum as its olefinic analogue. Oxidative cleavage
[Ru (VIII)] of the 5,6-double bond in norborneno bispeptides, as demonstrated with Leu bispeptide, afforded
novel cyclopentanoid peptide analogues. The promise of norbornene unit as a template for nucleating the
formation of two-stranded parallel β-sheets with minimum structural complexity is shown by the preparation
of higher members of norborneno bispeptides with the general structure NBE(Pep)2 [NBE = endo-cis-(2S,3R)-bicyclo[2.2.1]hept-5-en (norbornene) dicarbonyl unit; Pep = peptide strand with two, three, or four (same or
different) amino acid residues]. In 1H NMR, the high 3
J
HN
α values (7.0−9.3 Hz) observed for the amide
protons (Table ) coupled with the presence of medium to strong intrastrand sequential ROE connectivities
d
α
N(
i
,
i
+1) spanning the entire three- or four-residue sequence in the peptide strands of 9a
−
e and 10 and the
exhibition of relatively low-temperature coefficients (dδ/dT = − 0.2 to −3.4 ppb/K) for amide protons in
DMSO-d
6 solvent (Table ) clearly suggested that hydrogen-bonded β-sheet conformers dominate the population.
FT-IR and CD studies provided further support for parallel β-sheet structures. A particularly unique feature
of the norborneno bispeptides is their strong tendency to self-assemble in the solid sta...