A foundational goal of trait-based ecology, including trait-based restoration, is to link specific traits to community assembly, biodiversity, and ecosystem function. Despite a growing awareness of the importance of belowground traits for ecological processes, a synthesis of how root traits can inform restoration of terrestrial plant communities is lacking. We reviewed and summarized existing literature focused on root traits in relation to plant performance measures (i.e. survival, establishment, productivity) in the contexts of drought and competition (including invasion). Root traits related to belowground resource acquisition (e.g. high specific root length, deep roots) are frequently related to drought avoidance (i.e. a plant strategy based on optimizing water uptake to maintain function), whereas studies relating root traits to drought tolerance (i.e. a plant strategy that allows plants to withstand low hydration) remain limited. More studies have linked root traits to plant competitive effects (i.e. the influence a plant has on neighbors) than to competitive responses (i.e. a plant's ability to resist the effects of neighbors). Because plants with acquisitive traits decrease resources to the detriment of neighbors, root traits associated with rapid resource acquisition (e.g. high specific root length) may be important for understanding competitive effects. Albeit more limited, research suggests root traits associated with resource conservation or stress tolerance (e.g. high root tissue density, high root diameter) may elucidate mechanisms related to competitive responses. Re-vegetation outcomes may be improved by considering root traits, but only if clear links are made between traits and plant performance in varied contexts.
Enzymes involved in lipid biosynthesis and metabolism play an important role in energy conversion and storage and in the function of structural components such as cell membranes. The fatty aldehyde dehydrogenase (FAldDH) plays a central function in the metabolism of lipid intermediates, oxidizing fatty aldehydes to the corresponding fatty acid and competing with pathways that would further reduce the fatty aldehydes to fatty alcohols or require the fatty aldehydes to produce alkanes. In this report, the genes for four putative FAldDH enzymes from Marinobacter aquaeolei VT8 and an additional enzyme from Acinetobacter baylyi were heterologously expressed in Escherichia coli and shown to display FAldDH activity. Five enzymes (Maqu_0438, Maqu_3316, Maqu_3410, Maqu_3572, and the enzyme reported under RefSeq accession no. WP_004927398) were found to act on aldehydes ranging from acetaldehyde to hexadecanal and also acted on the unsaturated long-chain palmitoleyl and oleyl aldehydes. A comparison of the specificities of these enzymes with various aldehydes is presented. Crystallization trials yielded diffraction-quality crystals of one particular FAldDH (Maqu_3316) from M. aquaeolei VT8. Crystals were independently treated with both the NAD ϩ cofactor and the aldehyde substrate decanal, revealing specific details of the likely substrate binding pocket for this class of enzymes. A likely model for how catalysis by the enzyme is accomplished is also provided.IMPORTANCE This study provides a comparison of multiple enzymes with the ability to oxidize fatty aldehydes to fatty acids and provides a likely picture of how the fatty aldehyde and NAD ϩ are bound to the enzyme to facilitate catalysis. Based on the information obtained from this structural analysis and comparisons of specificities for the five enzymes that were characterized, correlations to the potential roles played by specific residues within the structure may be drawn.KEYWORDS Marinobacter, Maqu_3316, decanal, wax ester, lipid biosynthesis T he fates of fatty compounds within the cell are a central aspect of lipid metabolism. Enzymes involved in the metabolism of fatty compounds can play important roles in disease and have a biotechnological relevance for both the production of lipids or biofuels and the degradation of oils that are released into the environment (1). The bacterium Marinobacter aquaeolei VT8 was isolated from the head of an offshore oil well near Vietnam, where it would be expected to be participating in the biodegrada-
Host-associated microbiota play a critical role in host fitness by providing nutrition, enhancing digestion capabilities, and by providing protection from pathogens. Here, we investigated the effects of two environmental stressors, temperature, and salinity, on the microbiota associated with zebra mussels (ZMs), a highly invasive bivalve in North America. To examine this in detail, lake-collected ZMs were acclimated to laboratory conditions, and subjected to temperature and salinity stress conditions. The impact of these stressors on the diversity, composition, and dynamics of ZM-associated microbiota were assessed by using amplicon- and shotgun-based sequencing, and qPCR-based approaches. Elevated temperature was found to be the primary driver of ZM mortality, although salinity alone also increased its likelihood. Stressor-induced ZM mortality, which ranged between 53 and 100%, was concomitant with significant increases in the relative abundance of several genera of putative opportunistic pathogens including Aeromonas. These genera were only present in low relative abundance in ZMs obtained from the control tank with 0% mortality. Shotgun sequencing and qPCR analyses indicated that the relative and absolute abundances of pathogenic Aeromonas species (particularly A. veronii) were significantly greater in temperature-induced dead ZMs. Taken together, our results show that environmental stress, especially elevated temperature (> 25 °C), is associated with the rapid mortality of ZMs as well as the proliferation of putative opportunistic bacterial pathogens.
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