BackgroundUnicellular green algae of the genus Micrasterias (Desmidiales) have complex cells with multiple lobes and indentations, and therefore, they are considered model organisms for research on plant cell morphogenesis and variation. Micrasterias cells have a typical biradial symmetric arrangement and multiple terminal lobules. They are composed of two semicells that can be further differentiated into three structural components: the polar lobe and two lateral lobes. Experimental studies suggested that these cellular parts have specific evolutionary patterns and develop independently. In this study, different geometric morphometric methods were used to address whether the semicells of Micrasterias compereana are truly not integrated with regard to the covariation of their shape data. In addition, morphological integration within the semicells was studied to ascertain whether individual lobes constitute distinct units that may be considered as separate modules. In parallel, I sought to determine whether the main components of morphological asymmetry could highlight underlying cytomorphogenetic processes that could indicate preferred directions of variation, canalizing evolutionary changes in cellular morphology.ResultsDifferentiation between opposite semicells constituted the most prominent subset of cellular asymmetry. The second important asymmetric pattern, recovered by the Procrustes ANOVA models, described differentiation between the adjacent lobules within the quadrants. Other asymmetric components proved to be relatively unimportant. Opposite semicells were shown to be completely independent of each other on the basis of the partial least squares analysis analyses. In addition, polar lobes were weakly integrated with adjacent lateral lobes. Conversely, higher covariance levels between the two lateral lobes of the same semicell indicated mutual interconnection and significant integration between these parts.Conclusions Micrasterias cells are composed of several successively disintegrated parts. These integration patterns concurred with presumed scenarios of morphological evolution within the lineage. In addition, asymmetric differentiation in the shape of the lobules involves two major patterns: asymmetry across the isthmus axis and among the adjacent lobules. Notably, asymmetry among the adjacent lobules may be related to evolutionary differentiation among species, but it may also point out developmental instability related to environmental factors.Electronic supplementary materialThe online version of this article (doi:10.1186/s12862-016-0855-1) contains supplementary material, which is available to authorized users.

We report the species composition of subaerial epixylic algae and cyanobacteria from a South-East Asian mountain rainforest locality in Cibodas, West Java. Green algae (Trebouxiophyceae, Chlorophyceae, Trentepohliales) were dominant and Cyanobacteria were the second most frequent group. We specifically concentrated on the comparison of species composition of closed primary forest and open antropogenic spaces. Trentepohliales and Cyanobacteria dominated in open spaces with higher light intensities, whereas closed forest localities were dominated by trebouxiophycean coccal green algae. There was a significantly higher algal diversity in open spaces than in closed forest samples indicating the limiting effect of light on subaerial algal communities of closed tropical forests. A number of isolated strains and morphotypes probably represent undescribed taxa.

Kalinella bambusicola gen. et sp. nov. (Trebouxiophyceae, Chlorophyta), a novel coccoid Chlorella-like subaerial alga from Southeast Asiap re_534 159..169 SUMMARYThe traditional green algal genus Chlorella, which comprised coccoid algae surrounded by a smooth cell wall and reproducing solely by autosporulation, has proved to be polyphyletic and extremely diverse in phylogenetic terms. We studied a new subaerial Chlorella-like strain CAUP H7901 and morphological, ultrastructural, and molecular phylogenetic investigations indicated that it represents a new lineage of the trebouxiophycean Watanabea clade, dissimilar from other members of this group. The alga has globular coccoid cells with a single parietal pyrenoid-bearing chloroplast. The pyrenoid is transected by multiple radial thylakoid bands. The alga reproduces exclusively by means of asexual autospores of unequal size. In 18S rDNA sequence phylogenies, it was nested within the Watanabea clade close to lineages containing Chlorella saccharophila, Chlorella luteoviridis, Heveochlorella hainangensis, and two uncharacterized strains, but alternative positions within the Watanabea clade could not be rejected by an approximately unbiased (AU) test. Here we describe this organism as a new genus and species Kalinella bambusicola gen. et sp. nov. Furthermore, we describe Heterochlorella gen. nov. to accommodate a species previously referred to as Chlorella luteoviridis.

The diversity of green microalgae in subaerial habitats remains largely unexplored and a number of new genus- and species-level lineages have been discovered recently. The traditional green algal genus, Chlorella, which accommodated coccoid unicellular green algal species with globular to oval cells, reproducing entirely by autospores, has been found to be polyphyletic. In this study, we provide a detailed characterization of two strains of microalgae isolated from tree bark in the Mediterranean. These algae share the general Chlorella-like morphology and their 18S rRNA and rbcL gene sequences place them in the Trebouxiophyceae. Strain CAUP H8401 forms an independent trebouxiophycean lineage, together with three previously published 18S rRNA gene environmental sequences of undescribed microalgae, which were retrieved from profoundly different habitats. In contrast, strain CAUP H7902 is related to Kalinella bambusicola in the Watanabea clade of the Trebouxiophyceae on the basis of its 18S rRNA gene sequence. This relationship is also supported by the rbcL gene sequence, acquired from the type strain of K. bambusicola. The investigated strains are described as representatives of a novel species in a new genus, Leptochlorella corticola gen. et sp. nov., and a novel species, Kalinella apyrenoidosa sp. nov., according to the International Code of Nomenclature for Algae, Fungi and Plants.

The phylogenetic diversity of subaerial coccoid green algae remains still poorly explored. We characterised in detail two unicellular green algae found on tropical trees in Singapore. Light microscopy revealed morphological identity of these two strains. Depending on the age of cultures, the cells were spherical to cylindrical, and ranged in size from 13.5 to 20.5 mm. Each cell contained a pyrenoid-bearing parietal chloroplast that was typically somewhat detached from the plasma membrane on its parietal side. The cells reproduced by 4-16 globular autospores. The 18S rRNA gene sequences of the two strains differed by only a single nucleotide, indicating probable conspecificity. Because the strains were morphologically most comparable to species of the genus Parietochloris, we determined the 18S rRNA gene sequences from authentic strains of three Parietochloris species (P. alveolaris, P. cohaerens and P. ovoidea) for comparison. Molecular phylogenetic analyses placed all five examined strains into the class Trebouxiophyceae. The two novel tropical strains were found to be an independent lineage without an obvious sister group. The type species of the genus Parietochloris, P. alveolaris formed a monophyletic lineage with Parietochloris pseudalveolaris. Finally, P. cohaerens and P. ovoidea fell into another independent clade that also contained Lobosphaera tirolensis, L. incisa and Myrmecia bisecta, indicating that the genus Parietochloris as previously defined is polyphyletic. Based on our morphological and molecular phylogenetic data, we describe the two novel tropical strains as representatives of a new trebouxiophycean genus and species, Xylochloris irregularis gen. et sp. nov.