A sensitive and accurate identification of specific DNA fragments (usually containing a mutation) can influence clinical decisions. Standard methods routinely used for this type of detection are PCR (Polymerase Chain Reaction, and its modifications), and, less commonly, NGS (Next Generation Sequencing). However, these methods are quite complicated, requiring time-consuming, multi-stage sample preparation, and specially trained staff. Usually, it takes weeks for patients to obtain their results. Therefore, different DNA sensors are being intensively developed by many groups. One technique often used to obtain an analytical signal from DNA sensors is Raman spectroscopy. Its modification, surface-enhanced Raman spectroscopy (SERS), is especially useful for practical analytical applications due to its extra low limit of detection. SERS takes advantage of the strong increase in the efficiency of Raman signal generation caused by a local electric field enhancement near plasmonic (typically gold and silver) nanostructures. In this condensed review, we describe the most important types of SERS-based nanosensors for genetic studies and comment on their potential for becoming diagnostic tools.
In 2010, Tian et al. reported the development of a new, relatively sensitive method of the chemical analysis of various surfaces, including buried interfaces (for example the surfaces of solid samples in a high-pressure gas or a liquid), which makes it possible to analyze various biological samples
in situ
. They called their method shell-isolated nanoparticle-enhanced Raman spectroscopy (SHINERS). SHINERS spectroscopy is a type of surface-enhanced Raman spectroscopy (SERS) in which an increase in the efficiency of the Raman scattering is induced by plasmonic nanoparticles acting as electromagnetic resonators that locally significantly enhance the electric field of the incident electromagnetic radiation. In the case of SHINERS measurements, the plasmonic nanoparticles are covered by a very thin transparent protective layer (formed, for example, from various oxides such as SiO
2
, MnO
2
, TiO
2
, or organic polymers) that does not significantly damp surface electromagnetic enhancement, but does separate the nanoparticles from direct contact with the probed material and keeps them from agglomerating. Preventing direct contact between the metal plasmonic structures and the analyzed samples is especially important when biological samples are investigated, because direct interaction between the metal nanoparticles and various biological molecules (e.g., peptides) may lead to a change in the structure of those biomolecules. In this mini-review, the state of the art of SHINERS spectroscopy is briefly described.
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