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Fligh-throughput biomolecular proliling techniques such as transcriptomics, proteomics and metabolomics are increasingly being used in in vivo studies to recognize and characterize effects of xenobiotics on organs and systems, Of particular interest are biornalkers of treatment-related effects which are detectible in easily accessible biological fluids such as bloocl. A funclamentai challenge in such biomarker stuciies is selecting among the plethora of biomolecular changes induced by a compound and revealed by molecular profìling, to identify biomarkers which are exclusively or predominantly clLre to specific processes. In this work we present a cross-cornpaftrnent con'elation network approach, involvirig no a priori supervision or design, to integrate proteomic, metabolomic ancl transcriptomic data for selecting circulating biomarkers. The case stucly we present is the identification of bioniarkers of drug-induced hepatic toxicity effects in a rodent moclel. Biornolecular' profiling of both blood plasma and liver tissüe froni Wistar l-Iannover rats admirristerecl a toxic compound yielded many hundreds of statistically signihcant molecular changes, We exploited dmgincluced correlations between blood plasma analytes and liver tissue molecules across study animals in order to nominate selected plasnia molecules as biomarkers of drug-incluced hepatic alterations of lipid metabolisrn and urea cycle processes.

The development of the dual peroxisome proliferator-activated receptor (PPAR) alpha/gamma agonist tesaglitazar as an oral antidiabetic was recently discontinued. Here we present tumor data from a 2-year carcinogenicity study in rats given 0.3, 1, 3, and 10 micromol/kg tesaglitazar is presented with focus on the findings of subcutaneous fibrosarcomas. To investigate the mechanism for induction of fibrosarcomas, replicative DNA synthesis (immunohistochemical detection of BrdU-labeled cells) and expression of PPARgamma (immunohistochemistry and reverse transcription-polymerase chain reaction) in subcutaneous adipose tissues was assessed in rats administered 1 or 10 micromol/kg for 2 weeks or 3 months. Poorly differentiated subcutaneous mesenchymal sarcomas with a predominant spindle cell appearance occurred at the highest dose level of 10 micromol/kg in both sexes, and these tumors were diagnosed as fibrosarcomas. The 10-micromol/kg dose was at or above the maximum tolerated dose and caused considerable cardiovascular mortality. Tesaglitazar stimulated DNA synthesis mainly in subcutaneous interstitial mesenchymal cells. The percentage of BrdU-labeled interstitial cells was increased at 1 and 10 micromol/kg after 2 weeks. The increase in DNA synthesis was still significant at the end of the 12-week treatment at 10 mumol/kg, the dose producing fibrosarcoma. However, at 1 micromol/kg, a dose below the no-observed-effect level for fibrosarcoma, the level of DNA synthesis was similar to control levels at 12 weeks. Immunohistochemical analyses showed no detectable PPARgamma protein in the majority of BrdU-labeled interstitial mesenchymal cells in white and brown fat. This indicates that stimulation of DNA synthesis is not mediated via direct activation of PPARgamma in these cells. The results suggest that the induction of rat fibrosarcoma by tesaglitazar, at exposures 100-fold above the human therapeutic exposure, may involve proliferation of undifferentiated mesenchymal cells in subcutaneous tissues.