Mollusca represents the second largest animal phylum but remains poorly explored from a genomic perspective. While the recent increase in genomic resources holds great promise for a deep understanding of molluscan biology and evolution, access and utilization of these resources still pose a challenge. Here, we present the first comprehensive molluscan genomics database, MolluscDB (http://mgbase.qnlm.ac), which compiles and integrates current molluscan genomic/transcriptomic resources and provides convenient tools for multi-level integrative and comparative genomic analyses. MolluscDB enables a systematic view of genomic information from various aspects, such as genome assembly statistics, genome phylogenies, fossil records, gene information, expression profiles, gene families, transcription factors, transposable elements and mitogenome organization information. Moreover, MolluscDB offers valuable customized datasets or resources, such as gene coexpression networks across various developmental stages and adult tissues/organs, core gene repertoires inferred for major molluscan lineages, and macrosynteny analysis for chromosomal evolution. MolluscDB presents an integrative and comprehensive genomics platform that will allow the molluscan community to cope with ever-growing genomic resources and will expedite new scientific discoveries for understanding molluscan biology and evolution.
The main advantage of polychromatic sets-based assembly tolerance representation model is that the number of feature types to be processed is larger. However, the number of recommended assembly tolerance types generated by the model is somewhat large for the same feature surfaces. Furthermore, the model cannot be directly applied to further assembly tolerance analysis and synthesis due to the fact that the information of degrees of freedom cannot be processed in polychromatic sets. To further reduce the number of recommended assembly tolerance types and to lay foundation for further assembly tolerance analysis and synthesis, a spatial relation layer is introduced into the polychromatic sets-based model and an assembly tolerance representation model based on spatial relations for generating assembly tolerance types is proposed. The proposed model is hierarchically organized and consists of part layer, assembly feature surface layer, spatial relation layer and assembly tolerance type layer. Each layer is defined with an adjacency matrix, respectively. By the mapping from spatial relations to assembly tolerance types, the number of recommended assembly tolerance types generated by the mapping from feature surfaces to assembly tolerance types is able to be further reduced. In addition, the information of degrees of freedom can be attached in the elements of adjacency matrices when recommended assembly tolerance types are generated by spatial relations so that the proposed model can be directly applied to further assembly tolerance analysis and synthesis. The effectiveness of the proposed model is demonstrated by an approach for generating assembly tolerance types and a practical example.
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