Three-dimensional (3D) biomedical image sets are often acquired with in-plane pixel spacings that are far less than the out-of-plane spacings between images. The resultant anisotropy, which can be detrimental in many applications, can be decreased using image interpolation. Optical flow and/or other registration-based interpolators have proven useful in such interpolation roles in the past. When acquired images are comprised of signals that describe the flow velocity of fluids, additional information is available to guide the interpolation process. In this paper, we present an optical-flow based framework for image interpolation that also minimizes resultant divergence in the interpolated data.
In two-color multiview (2CMV) advanced geospatial information (AGI) products, temporal changes in synthetic aperture radar (SAR) images acquired at different times are detected, colorized, and overlaid on an initial image such that new features are represented in cyan, and features that have disappeared are represented in red. Accurate detection of temporal changes in 2CMV AGI products can be challenging because of ’speckle noise’ susceptibility and false positives that result from small orientation differences between objects imaged at different times. Accordingly, 2CMV products are often dominated by colored pixels when changes are detected via simple pixel-wise cross-correlation. The state-of-the-art in SAR image processing demonstrates that generating efficient 2CMV products, while accounting for the aforementioned problem cases, has not been well addressed. We propose a methodology to address the aforementioned two problem cases. Before detecting temporal changes, speckle and smoothing filters mitigate the effects of speckle noise. To detect temporal changes, we propose using unsupervised feature learning algorithms in conjunction with optical flow algorithms that track the motion of objects across time in small regions of interest. The proposed framework for distinguishing between actual motion and misregistration can lead to more accurate and meaningful change detection and improve object extraction from an SAR AGI product.
Background: Applications in clinical medicine can benefit from fusion of spectroscopy data with anatomical imagery. For example, new 3-dimensional (3D) spectroscopy techniques allow for improved correlation of metabolite profiles with specific regions of interest in anatomical tumor images, which can be useful in characterizing and treating heterogeneous tumors that appear structurally homogeneous. Objectives: We sought to develop a clinical workflow and uniquely capable custom software tool to integrate advanced 3-tesla 3D proton magnetic resonance spectroscopic imaging (1H-MRSI) into industry standard image-guided neuronavigation systems, especially for use in brain tumor surgery. Methods:1H-MRSI spectra from preoperative scanning on 15 patients with recurrent or newly diagnosed meningiomas were processed and analyzed, and specific voxels were selected based on their chemical contents. 3D neuronavigation overlays were then generated and applied to anatomical image data in the operating room. The proposed 3D methods fully account for scanner calibration and comprise tools that we have now made publicly available. Results: The new methods were quantitatively validated through a phantom study and applied successfully to mitigate biopsy uncertainty in a clinical study of meningiomas. Conclusions: The proposed methods improve upon the current state of the art in neuronavigation through the use of detailed 3D 1H-MRSI data. Specifically, 3D MRSI-based overlays provide comprehensive, quantitative visual cues and location information during neurosurgery, enabling a progressive new form of online spectroscopy-guided neuronavigation.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.